myRT

myRT report for GCA_013267615.1_ASM1326761v1

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Seq: CP054012.1 Parabacteroides distasonis strain FDAARGOS_759 chromosome, complete genome (4926033 bp)
Overview 1 RT 1: 272633-275918 bp 2 RT 2: 1551768-1558332 bp Neighborhood of RT #1 [272633, 275918] Lrp RhaT RVT-Retrons HTH_XRE Neighborhood of RT #2 [1551768, 1558382] RVT-GII GIIM RVT-GII GIIM DUF1963 Feature: gene Location: 272633-273106 bp Ori: QKH96324.1 Feature: domain Description: Lrp Location: 272639-273080 bp Feature: domain Description: Lrp Location: 272639-273080 bp Feature: gene Location: 273270-274142 bp Ori: QKH96325.1 Feature: domain Description: RhaT Location: 273306-274137 bp Feature: domain Description: RhaT Location: 273306-2741 37 bp Feature: gene Location: 274498-275358 bp Ori: QKH96326.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 274648-275179 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 274648-2751 79 bp Feature: gene Location: 275355-275660 bp Ori: QKH96327.1 Feature: domain Description: HTH_XRE Location: 275367-275529 bp Feature: domain Description: HTH_XRE Location: 275367-275529 bp Feature: gene Location: 275688-275918 bp Feature: gene Location: 1551768-1552499 bp Feature: gene Location: 1552565-1553128 bp Feature: gene Location: 1553269-1554561 bp Ori: QKH97326.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1553479-1554136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 553479-1 5541 36 bp Feature: domain Description: GIIM Note: maturase Location: 1554214-1554421 bp Feature: domain Description: GIIM Note: maturase Location: 1 55421 4-1 554421 bp Feature: gene Location: 1555045-1556394 bp Ori: QKH97327.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555240-1555855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 555240-1 555855 bp Feature: domain Description: GIIM Note: maturase Location: 1555918-1556140 bp Feature: domain Description: GIIM Note: maturase Location: 1 55591 8-1 5561 40 bp Feature: gene Location: 1556988-1557608 bp Feature: gene Location: 1557681-1558382 bp Ori: QKH97329.1 Feature: domain Description: DUF1963 Location: 1557786-1558332 bp Feature: domain Description: DUF1 963 Location: 1 557786-1 558332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lrp (COG1522), RhaT (TIGR00776), RVT-Retrons, HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), DUF1963 (pfam09234)