myRT

myRT report for GCA_013267775.1_ASM1326777v1

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Seq: CP053930.1 Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence (211003 bp)
Overview 1 RT 1: 24120-32972 bp 2 RT 2: 36748-41975 bp 3 RT 3: 46501-50790 bp Neighborhood of RT #1 [24120, 33151] TraG-D_C Ftsk_gamma Ftsk_gamma RVT_N RVT-GII GIIM nuc_hydro rpsA Neighborhood of RT #2 [36748, 41980] COG4712 RVT-GII beta_clamp Neighborhood of RT #3 [46501, 50790] E1_enzyme_family RVT-GII Intron_maturas2 HNHc E1_enzyme_family Feature: gene Location: 24120-24506 bp Feature: gene Location: 24524-28024 bp Ori: QKI10506.1 Feature: domain Description: TraG-D_C Location: 26141-26501 bp Feature: domain Description: TraG-D_C Location: 261 41 -26501 bp Feature: domain Description: Ftsk_gamma Location: 26909-27086 bp Feature: domain Description: Ftsk_gamma Location: 26909-27086 bp Feature: domain Description: Ftsk_gamma Location: 27218-27353 bp Feature: domain Description: Ftsk_gamma Location: 2721 8-27353 bp Feature: gene Location: 28237-29883 bp Ori: QKI10507.1 Gene: ltrA Feature: domain Description: RVT_N Location: 28279-28516 bp Feature: domain Description: RVT_N Location: 28279-2851 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28570-29230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28570-29230 bp Feature: domain Description: GIIM Note: maturase Location: 29299-29530 bp Feature: domain Description: GIIM Note: maturase Location: 29299-29530 bp Feature: gene Location: 30603-31553 bp Ori: QKI10508.1 Feature: domain Description: nuc_hydro Location: 30618-31524 bp Feature: domain Description: nuc_hydro Location: 3061 8-31 524 bp Feature: gene Location: 32168-33151 bp Ori: QKI10509.1 Feature: domain Description: rpsA Location: 32435-32972 bp Feature: domain Description: rpsA Location: 32435-32972 bp Feature: gene Location: 36748-37143 bp Feature: gene Location: 37166-37522 bp Ori: QKI10516.1 Feature: domain Description: COG4712 Location: 37175-37517 bp Feature: domain Description: COG471 2 Location: 371 75-3751 7 bp Feature: gene Location: 38284-40182 bp Ori: QKI10517.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38599-39301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38599-39301 bp Feature: gene Location: 40260-40787 bp Feature: gene Location: 40868-41980 bp Ori: QKI10519.1 Gene: dnaN Feature: domain Description: beta_clamp Location: 40871-41975 bp Feature: domain Description: beta_clamp Location: 40871 -41 975 bp Feature: gene Location: 46501-46911 bp Feature: gene Location: 46914-47096 bp Ori: QKI10528.1 Feature: domain Description: E1_enzyme_family Location: 46962-47082 bp Feature: domain Description: E1 _enzyme_family Location: 46962-47082 bp Feature: gene Location: 47665-49605 bp Ori: QKI10529.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47995-48832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47995-48832 bp Feature: domain Description: Intron_maturas2 Location: 48970-49261 bp Feature: domain Description: Intron_maturas2 Location: 48970-49261 bp Feature: domain Description: HNHc Note: nucleases Location: 49393-49552 bp Feature: domain Description: HNHc Note: nucleases Location: 49393-49552 bp Feature: gene Location: 49722-50399 bp Feature: domain Description: E1_enzyme_family Location: 49725-50250 bp Feature: domain Description: E1 _enzyme_family Location: 49725-50250 bp Feature: gene Location: 50419-50790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), rpsA (TIGR00717), COG4712 (Uncharacterized protein ), beta_clamp (cl29549), E1_enzyme_family (cl22428)
Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CP053931.1 Bacillus cereus strain FDAARGOS_797 chromosome, complete genome (5413450 bp)
Overview 1 RT 1: 3269176-3278769 bp 2 RT 2: 3448390-3460751 bp Neighborhood of RT #1 [3269176, 3278771] PRK09194 polC RVT-GII HNHc polC PRK00092 Neighborhood of RT #2 [3448390, 3460751] CcdC B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Feature: gene Location: 3269176-3270876 bp Ori: QKI13869.1 Gene: proS Feature: domain Description: PRK09194 Location: 3269179-3270865 bp Feature: domain Description: PRK09194 Location: 32 69179-32 70865 bp Feature: gene Location: 3271001-3273898 bp Feature: domain Description: polC Location: 3271019-3273896 bp Feature: domain Description: polC Location: 32 71019-32 73896 bp Feature: gene Location: 3274641-3276455 bp Ori: QKI16003.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3274935-3275631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 74935-32 75631 bp Feature: domain Description: HNHc Note: nucleases Location: 3276177-3276336 bp Feature: domain Description: HNHc Note: nucleases Location: 32 76177-32 76336 bp Feature: gene Location: 3276529-3277968 bp Ori: QKI16004.1 Feature: domain Description: polC Location: 3276562-3277966 bp Feature: domain Description: polC Location: 32 76562 -32 77966 bp Feature: gene Location: 3278301-3278771 bp Ori: QKI13870.1 Gene: rimP Feature: domain Description: PRK00092 Location: 3278307-3278769 bp Feature: domain Description: PRK00092 Location: 32 78307-32 78769 bp Feature: gene Location: 3448390-3448896 bp Ori: QKI14025.1 Feature: domain Description: CcdC Location: 3448399-3448861 bp Feature: domain Description: CcdC Location: 3448399-3448861 bp Feature: gene Location: 3448959-3450248 bp Ori: QKI14026.1 Feature: domain Description: B_ant_repeat Location: 3449046-3449157 bp Feature: domain Description: B_ant_repeat Location: 3449046-3449157 bp Feature: domain Description: B_ant_repeat Location: 3449397-3449553 bp Feature: domain Description: B_ant_repeat Location: 3449397-3449553 bp Feature: domain Description: B_ant_repeat Location: 3449796-3449952 bp Feature: domain Description: B_ant_repeat Location: 3449796-3449952 bp Feature: gene Location: 3450941-3452869 bp Ori: QKI14027.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3451262-3451997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34512 62 -3451997 bp Feature: domain Description: HNHc Note: nucleases Location: 3452588-3452753 bp Feature: domain Description: HNHc Note: nucleases Location: 3452 588-3452 753 bp Feature: gene Location: 3453038-3459403 bp Ori: QKI14028.1 Feature: domain Description: B_ant_repeat Location: 3453047-3453185 bp Feature: domain Description: B_ant_repeat Location: 3453047-3453185 bp Feature: domain Description: B_ant_repeat Location: 3453422-3453575 bp Feature: domain Description: B_ant_repeat Location: 345342 2 -3453575 bp Feature: domain Description: B_ant_repeat Location: 3453812-3453965 bp Feature: domain Description: B_ant_repeat Location: 3453812 -3453965 bp Feature: domain Description: B_ant_repeat Location: 3454205-3454361 bp Feature: domain Description: B_ant_repeat Location: 34542 05-3454361 bp Feature: domain Description: B_ant_repeat Location: 3454601-3454754 bp Feature: domain Description: B_ant_repeat Location: 3454601-3454754 bp Feature: domain Description: B_ant_repeat Location: 3454997-3455153 bp Feature: domain Description: B_ant_repeat Location: 3454997-3455153 bp Feature: domain Description: B_ant_repeat Location: 3455393-3455549 bp Feature: domain Description: B_ant_repeat Location: 3455393-3455549 bp Feature: domain Description: B_ant_repeat Location: 3455789-3455942 bp Feature: domain Description: B_ant_repeat Location: 3455789-3455942 bp Feature: domain Description: B_ant_repeat Location: 3456185-3456341 bp Feature: domain Description: B_ant_repeat Location: 3456185-3456341 bp Feature: domain Description: B_ant_repeat Location: 3456581-3456734 bp Feature: domain Description: B_ant_repeat Location: 3456581-3456734 bp Feature: domain Description: B_ant_repeat Location: 3456977-3457133 bp Feature: domain Description: B_ant_repeat Location: 3456977-3457133 bp Feature: domain Description: B_ant_repeat Location: 3457373-3457529 bp Feature: domain Description: B_ant_repeat Location: 3457373-345752 9 bp Feature: domain Description: B_ant_repeat Location: 3457769-3457925 bp Feature: domain Description: B_ant_repeat Location: 3457769-345792 5 bp Feature: domain Description: B_ant_repeat Location: 3458165-3458318 bp Feature: domain Description: B_ant_repeat Location: 3458165-3458318 bp Feature: domain Description: B_ant_repeat Location: 3458561-3458717 bp Feature: domain Description: B_ant_repeat Location: 3458561-3458717 bp Feature: domain Description: B_ant_repeat Location: 3458957-3459113 bp Feature: domain Description: B_ant_repeat Location: 3458957-3459113 bp Feature: gene Location: 3459681-3460751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09194 (prolyl-tRNA synthetase; Provisional), polC (TIGR00354), RVT-GII, HNHc (smart00507), PRK00092 (ribosome maturation protein RimP; Reviewed), CcdC (COG4846), B_ant_repeat (TIGR01451)