myRT

myRT report for GCA_013282295.1_ASM1328229v1

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Seq: CP042882.1 Klebsiella pneumoniae strain NMBU-W07E18 chromosome, complete genome (5314939 bp)
Overview 1 RT 1: 717784-725132 bp 2 RT 2: 2884588-2888835 bp 3 RT 3: 3145336-3148167 bp Neighborhood of RT #1 [717784, 725182] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #2 [2884588, 2888835] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3145336, 3148178] PRK10276 RVT-GII DinI Feature: gene Location: 717784-718548 bp Ori: QKI43513.1 Feature: domain Description: FimC Location: 717829-718531 bp Feature: domain Description: FimC Location: 71 7829-71 8531 bp Feature: gene Location: 718595-721189 bp Ori: QKI47619.1 Feature: domain Description: FimD Location: 718637-721178 bp Feature: domain Description: FimD Location: 71 8637-721 1 78 bp Feature: gene Location: 721186-723267 bp Ori: QKI43514.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 721597-722041 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 721 597-722041 bp Feature: gene Location: 723309-723764 bp Ori: QKI47620.1 Feature: domain Description: Integrase_1 Location: 723312-723546 bp Feature: domain Description: Integrase_1 Location: 72331 2-723546 bp Feature: gene Location: 723944-725182 bp Feature: domain Description: PRK09692 Location: 723950-725132 bp Feature: domain Description: PRK09692 Location: 723950-7251 32 bp Feature: gene Location: 2884588-2885853 bp Ori: QKI45456.1 Feature: domain Description: umuC Location: 2884591-2885851 bp Feature: domain Description: umuC Location: 2884591 -2885851 bp Feature: gene Location: 2885855-2886274 bp Ori: QKI45457.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2885858-2886269 bp Feature: domain Description: PRK1 0276 Location: 2885858-2886269 bp Feature: gene Location: 2886352-2887836 bp Ori: QKI47733.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2886754-2887444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2886754-2887444 bp Feature: gene Location: 2887836-2888087 bp Feature: gene Location: 2888746-2888835 bp Feature: gene Location: 3145336-3145755 bp Ori: QKI45706.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3145339-3145750 bp Feature: domain Description: PRK1 0276 Location: 31 45339-31 45750 bp Feature: gene Location: 3145733-3145918 bp Feature: gene Location: 3145834-3147318 bp Ori: QKI47746.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3146236-3146926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 46236-31 46926 bp Feature: gene Location: 3147318-3147569 bp Feature: gene Location: 3147936-3148178 bp Ori: QKI45709.1 Feature: domain Description: DinI Location: 3147987-3148167 bp Feature: domain Description: DinI Location: 31 47987-31 481 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183)