myRT

myRT report for GCA_013283955.1_ASM1328395v1

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Seq: CP054157.1 Proteus vulgaris strain Biosolid 26 chromosome, complete genome (4083478 bp)
Overview 1 RT 1: 1731006-1736007 bp 2 RT 2: 2976461-2982511 bp Neighborhood of RT #1 [1731006, 1736024] SLATT_5 RVT-UG17 PRK09692 HTH_18 Neighborhood of RT #2 [2976461, 2982511] Fdh-alpha Fdh-alpha SLC6sbd_Tyt1-Like RVT-Retrons Feature: gene Location: 1731006-1731161 bp Feature: gene Location: 1731755-1732315 bp Ori: QKJ48692.1 Feature: domain Description: SLATT_5 Location: 1731764-1732301 bp Feature: domain Description: SLATT_5 Location: 1 731 764-1 732301 bp Feature: gene Location: 1732317-1733651 bp Ori: QKJ48693.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1732545-1733151 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 732545-1 7331 51 bp Feature: gene Location: 1733648-1734814 bp Ori: QKJ48694.1 Feature: domain Description: PRK09692 Location: 1733654-1734803 bp Feature: domain Description: PRK09692 Location: 1 733654-1 734803 bp Feature: gene Location: 1735248-1736024 bp Ori: QKJ48695.1 Feature: domain Description: HTH_18 Location: 1735776-1736007 bp Feature: domain Description: HTH_1 8 Location: 1 735776-1 736007 bp Feature: gene Location: 2976461-2978629 bp Gene: fdhF Feature: domain Description: Fdh-alpha Location: 2976482-2976887 bp Feature: domain Description: Fdh-alpha Location: 2976482-2976887 bp Feature: domain Description: Fdh-alpha Location: 2977217-2978519 bp Feature: domain Description: Fdh-alpha Location: 297721 7-297851 9 bp Feature: gene Location: 2979245-2980559 bp Feature: domain Description: SLC6sbd_Tyt1-Like Location: 2979254-2980367 bp Feature: domain Description: SLC6sbd_Tyt1 -Like Location: 2979254-2980367 bp Feature: gene Location: 2980666-2981580 bp Ori: QKJ49426.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2980765-2981341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2980765-2981 341 bp Feature: gene Location: 2981570-2982067 bp Feature: gene Location: 2982077-2982511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, PRK09692 (Integrase; provisional), HTH_18 (pfam12833), Fdh-alpha (TIGR01591), SLC6sbd_Tyt1-Like (cd10336), RVT-Retrons