myRT

myRT report for GCA_013305685.1_ASM1330568v1

Download annotations/find similar RTs

Seq: CP045553.1 Pseudomonas sp. 13159349 chromosome, complete genome (5977292 bp)
Overview 1 RT 1: 1414639-1417722 bp 2 RT 2: 1656304-1661623 bp Neighborhood of RT #1 [1414639, 1417736] DUF4884 RVT-DGRs DUF1566 Neighborhood of RT #2 [1656304, 1661628] FlaA1 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 1414639-1414992 bp Ori: QKK95752.1 Feature: domain Description: DUF4884 Location: 1414726-1414819 bp Feature: domain Description: DUF4884 Location: 1 41 4726-1 41 481 9 bp Feature: gene Location: 1414989-1415318 bp Feature: gene Location: 1415401-1416558 bp Ori: QKK95754.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1415650-1416334 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 41 5650-1 41 6334 bp Feature: gene Location: 1416757-1417111 bp Feature: gene Location: 1417164-1417736 bp Ori: QKK95755.1 Feature: domain Description: DUF1566 Location: 1417494-1417722 bp Feature: domain Description: DUF1 566 Location: 1 41 7494-1 41 7722 bp Feature: gene Location: 1656304-1658316 bp Ori: QKK99743.1 Feature: domain Description: FlaA1 Location: 1656379-1658284 bp Feature: domain Description: FlaA1 Location: 1 656379-1 658284 bp Feature: gene Location: 1658378-1658553 bp Feature: gene Location: 1658861-1659773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1659365-1659440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 659365-1 659440 bp Feature: gene Location: 1659833-1661372 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1659962-1660172 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 659962-1 6601 72 bp Feature: domain Description: zf-IS66 Location: 1660202-1660325 bp Feature: domain Description: zf-IS66 Location: 1 660202-1 660325 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1660370-1660961 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 660370-1 660961 bp Feature: gene Location: 1661521-1661628 bp Feature: domain Description: TnpB_IS66 Location: 1661548-1661623 bp Feature: domain Description: TnpB_IS66 Location: 1 661 548-1 661 623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4884 (pfam16225), RVT-DGRs, DUF1566 (pfam07603), FlaA1 (COG1086), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)