myRT

myRT report for GCA_013306395.1_ASM1330639v1

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Seq: CP052091.1 Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence (2053896 bp)
Overview 1 RT 1: 1021761-1027814 bp Neighborhood of RT #1 [1021761, 1028320] AcrR MFS_MucK RVT-GII COG4544 PolY_like Feature: gene Location: 1021761-1022336 bp Ori: QKL64111.1 Feature: domain Description: AcrR Location: 1021773-1022319 bp Feature: domain Description: AcrR Location: 1 021 773-1 02231 9 bp Feature: gene Location: 1022545-1023801 bp Ori: QKL64112.1 Feature: domain Description: MFS_MucK Location: 1022638-1023778 bp Feature: domain Description: MFS_MucK Location: 1 022638-1 023778 bp Feature: gene Location: 1024305-1025836 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024716-1025115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 02471 6-1 0251 1 5 bp Feature: gene Location: 1025881-1026816 bp Ori: QKL64113.1 Gene: imuA Feature: domain Description: COG4544 Location: 1025989-1026493 bp Feature: domain Description: COG4544 Location: 1 025989-1 026493 bp Feature: gene Location: 1026749-1028320 bp Ori: QKL64114.1 Feature: domain Description: PolY_like Location: 1026764-1027814 bp Feature: domain Description: PolY_like Location: 1 026764-1 02781 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MFS_MucK (cd17371), RVT-GII, COG4544 (Uncharacterized conserved protein ), PolY_like (cd03468)

Seq: CP052090.1 Ralstonia solanacearum strain FJAT15340.F6 chromosome, complete genome (3669421 bp)
Overview 1 RT 1: 1323416-1332971 bp 2 RT 2: 2725248-2730638 bp Neighborhood of RT #1 [1323416, 1332973] DUF4007 RVT-GII Arm-DNA-bind_3 GlutR_N INT_P4_C PRK11712 Neighborhood of RT #2 [2725248, 2730638] ParB_N_like_MT YhdJ ParB_N_like_MT YhdJ RVT-GII GIIM Feature: gene Location: 1323416-1326751 bp Feature: gene Location: 1326744-1327667 bp Ori: QKL61276.1 Feature: domain Description: DUF4007 Location: 1326792-1327662 bp Feature: domain Description: DUF4007 Location: 132 6792 -132 7662 bp Feature: gene Location: 1328107-1329639 bp Ori: QKL61277.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1328518-1329208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 8518-132 92 08 bp Feature: gene Location: 1330135-1331352 bp Ori: QKL61278.1 Feature: domain Description: Arm-DNA-bind_3 Location: 1330183-1330414 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1330183-1330414 bp Feature: domain Description: GlutR_N Location: 1330426-1330669 bp Feature: domain Description: GlutR_N Location: 133042 6-1330669 bp Feature: domain Description: INT_P4_C Location: 1330777-1331314 bp Feature: domain Description: INT_P4_C Location: 1330777-1331314 bp Feature: gene Location: 1331504-1332973 bp Ori: QKL61279.1 Gene: rng Feature: domain Description: PRK11712 Location: 1331507-1332971 bp Feature: domain Description: PRK11712 Location: 1331507-1332 971 bp Feature: gene Location: 2725248-2726522 bp Ori: QKL62422.1 Feature: domain Description: ParB_N_like_MT Location: 2725290-2725551 bp Feature: domain Description: ParB_N_like_MT Location: 2 72 52 90-2 72 5551 bp Feature: domain Description: YhdJ Location: 2725719-2726442 bp Feature: domain Description: YhdJ Location: 2 72 5719-2 72 6442 bp Feature: gene Location: 2726519-2727922 bp Ori: QKL62423.1 Feature: domain Description: ParB_N_like_MT Location: 2726546-2726801 bp Feature: domain Description: ParB_N_like_MT Location: 2 72 6546-2 72 6801 bp Feature: domain Description: YhdJ Location: 2727011-2727839 bp Feature: domain Description: YhdJ Location: 2 72 7011-2 72 7839 bp Feature: gene Location: 2728149-2729387 bp Ori: QKL62424.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728353-2729010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 8353-2 72 9010 bp Feature: domain Description: GIIM Note: maturase Location: 2729091-2729301 bp Feature: domain Description: GIIM Note: maturase Location: 2 72 9091-2 72 9301 bp Feature: gene Location: 2729822-2729971 bp Feature: gene Location: 2730231-2730638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4007 (pfam13182), RVT-GII, Arm-DNA-bind_3 (pfam13356), GlutR_N (pfam05201), INT_P4_C (cd00801), PRK11712 (ribonuclease G; Provisional), ParB_N_like_MT (cd16844), YhdJ (COG0863), GIIM (pfam08388)