myRT

myRT report for GCA_013306415.1_ASM1330641v1

Download annotations/find similar RTs

Seq: CP052094.1 Ralstonia solanacearum strain FJAT15340.F1 chromosome, complete genome (3669428 bp)
Overview 1 RT 1: 1326751-1332978 bp 2 RT 2: 2725254-2730843 bp Neighborhood of RT #1 [1326751, 1332980] DUF4007 RVT-GII INT_P4_C PRK11712 Neighborhood of RT #2 [2725254, 2730843] ParB_N_like_MT YhdJ ParB_N_like_MT YhdJ RVT-GII GIIM Feature: gene Location: 1326751-1327491 bp Feature: domain Description: DUF4007 Location: 1326754-1327486 bp Feature: domain Description: DUF4007 Location: 1 326754-1 327486 bp Feature: gene Location: 1327910-1328122 bp Feature: gene Location: 1328114-1329646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1328525-1329215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 328525-1 32921 5 bp Feature: gene Location: 1330142-1330945 bp Feature: domain Description: INT_P4_C Location: 1330370-1330907 bp Feature: domain Description: INT_P4_C Location: 1 330370-1 330907 bp Feature: gene Location: 1331511-1332980 bp Feature: domain Description: PRK11712 Location: 1331514-1332978 bp Feature: domain Description: PRK1 1 71 2 Location: 1 331 51 4-1 332978 bp Feature: gene Location: 2725254-2726528 bp Feature: domain Description: ParB_N_like_MT Location: 2725296-2725557 bp Feature: domain Description: ParB_N_like_MT Location: 2725296-2725557 bp Feature: domain Description: YhdJ Location: 2725725-2726448 bp Feature: domain Description: YhdJ Location: 2725725-2726448 bp Feature: gene Location: 2726525-2727928 bp Feature: domain Description: ParB_N_like_MT Location: 2726552-2726807 bp Feature: domain Description: ParB_N_like_MT Location: 2726552-2726807 bp Feature: domain Description: YhdJ Location: 2727017-2727845 bp Feature: domain Description: YhdJ Location: 272701 7-2727845 bp Feature: gene Location: 2728155-2729393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728359-2729016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728359-272901 6 bp Feature: domain Description: GIIM Note: maturase Location: 2729097-2729307 bp Feature: domain Description: GIIM Note: maturase Location: 2729097-2729307 bp Feature: gene Location: 2730237-2730644 bp Feature: gene Location: 2730634-2730843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4007 (pfam13182), RVT-GII, INT_P4_C (cd00801), PRK11712 (ribonuclease G; Provisional), ParB_N_like_MT (cd16844), YhdJ (COG0863), GIIM (pfam08388)

Seq: CP052095.1 Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence (2053891 bp)
Overview 1 RT 1: 801042-821601 bp 2 RT 2: 1022543-1027813 bp Neighborhood of RT #1 [801042, 821601] PRK12467 PRK12467 PRK12316 PRK12467 PRK12467 PRK12467 PP-binding PRK12316 PRK12467 entF RVT-GII Neighborhood of RT #2 [1022543, 1028319] MFS_MucK RVT-GII COG4544 PolY_like Feature: gene Location: 801042-818906 bp Feature: domain Description: PRK12467 Location: 801261-802536 bp Feature: domain Description: PRK12 467 Location: 8012 61-802 536 bp Feature: domain Description: PRK12467 Location: 802566-804354 bp Feature: domain Description: PRK12 467 Location: 802 566-804354 bp Feature: domain Description: PRK12316 Location: 804492-807645 bp Feature: domain Description: PRK12 316 Location: 804492 -807645 bp Feature: domain Description: PRK12467 Location: 807681-808932 bp Feature: domain Description: PRK12 467 Location: 807681-808932 bp Feature: domain Description: PRK12467 Location: 808977-809472 bp Feature: domain Description: PRK12 467 Location: 808977-809472 bp Feature: domain Description: PRK12467 Location: 809490-813753 bp Feature: domain Description: PRK12 467 Location: 809490-813753 bp Feature: domain Description: PP-binding Location: 813807-813996 bp Feature: domain Description: PP-binding Location: 813807-813996 bp Feature: domain Description: PRK12316 Location: 814020-817188 bp Feature: domain Description: PRK12 316 Location: 81402 0-817188 bp Feature: domain Description: PRK12467 Location: 817344-817527 bp Feature: domain Description: PRK12 467 Location: 817344-81752 7 bp Feature: domain Description: entF Location: 818028-818427 bp Feature: domain Description: entF Location: 81802 8-81842 7 bp Feature: gene Location: 819223-819435 bp Feature: gene Location: 819427-820959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819838-820528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819838-82 052 8 bp Feature: gene Location: 820956-821408 bp Feature: gene Location: 821443-821601 bp Feature: gene Location: 1022543-1023799 bp Feature: domain Description: MFS_MucK Location: 1022636-1023776 bp Feature: domain Description: MFS_MucK Location: 102 2 636-102 3776 bp Feature: gene Location: 1024099-1024311 bp Feature: gene Location: 1024303-1025835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024714-1025404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 4714-102 5404 bp Feature: gene Location: 1025832-1026815 bp Feature: domain Description: COG4544 Location: 1025988-1026492 bp Feature: domain Description: COG4544 Location: 102 5988-102 6492 bp Feature: gene Location: 1026838-1028319 bp Feature: domain Description: PolY_like Location: 1026847-1027813 bp Feature: domain Description: PolY_like Location: 102 6847-102 7813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12467 (peptide synthase; Provisional), PRK12316 (peptide synthase; Provisional), PP-binding (pfam00550), entF (PRK10252), RVT-GII, MFS_MucK (cd17371), COG4544 (Uncharacterized conserved protein ), PolY_like (cd03468)