myRT

myRT report for GCA_013306475.1_ASM1330647v1

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Seq: CP052099.1 Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence (2053891 bp)
Overview 1 RT 1: 1021759-1027813 bp Neighborhood of RT #1 [1021759, 1028319] AcrR MFS_MucK RVT-GII COG4544 PolY_like Feature: gene Location: 1021759-1022334 bp Ori: QKL68918.1 Feature: domain Description: AcrR Location: 1021771-1022317 bp Feature: domain Description: AcrR Location: 1 021 771 -1 02231 7 bp Feature: gene Location: 1022543-1023799 bp Ori: QKL68919.1 Feature: domain Description: MFS_MucK Location: 1022636-1023776 bp Feature: domain Description: MFS_MucK Location: 1 022636-1 023776 bp Feature: gene Location: 1024303-1025835 bp Ori: QKL68920.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024714-1025404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 02471 4-1 025404 bp Feature: gene Location: 1025880-1026815 bp Ori: QKL68921.1 Gene: imuA Feature: domain Description: COG4544 Location: 1025988-1026492 bp Feature: domain Description: COG4544 Location: 1 025988-1 026492 bp Feature: gene Location: 1026748-1028319 bp Ori: QKL68922.1 Feature: domain Description: PolY_like Location: 1026763-1027813 bp Feature: domain Description: PolY_like Location: 1 026763-1 02781 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MFS_MucK (cd17371), RVT-GII, COG4544 (Uncharacterized conserved protein ), PolY_like (cd03468)

Seq: CP052098.1 Ralstonia solanacearum strain FJAT15304.F50 chromosome, complete genome (3669429 bp)
Overview 1 RT 1: 1323423-1332978 bp 2 RT 2: 2725255-2730645 bp Neighborhood of RT #1 [1323423, 1332980] DUF4007 RVT-GII Arm-DNA-bind_3 GlutR_N INT_P4_C PRK11712 Neighborhood of RT #2 [2725255, 2730645] ParB_N_like_MT YhdJ ParB_N_like_MT YhdJ RVT-GII GIIM Feature: gene Location: 1323423-1326758 bp Feature: gene Location: 1326751-1327674 bp Ori: QKL66074.1 Feature: domain Description: DUF4007 Location: 1326799-1327669 bp Feature: domain Description: DUF4007 Location: 132 6799-132 7669 bp Feature: gene Location: 1328114-1329646 bp Ori: QKL66075.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1328525-1329215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 852 5-132 92 15 bp Feature: gene Location: 1330142-1331359 bp Ori: QKL66076.1 Feature: domain Description: Arm-DNA-bind_3 Location: 1330190-1330421 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1330190-133042 1 bp Feature: domain Description: GlutR_N Location: 1330433-1330676 bp Feature: domain Description: GlutR_N Location: 1330433-1330676 bp Feature: domain Description: INT_P4_C Location: 1330784-1331321 bp Feature: domain Description: INT_P4_C Location: 1330784-133132 1 bp Feature: gene Location: 1331511-1332980 bp Ori: QKL66077.1 Gene: rng Feature: domain Description: PRK11712 Location: 1331514-1332978 bp Feature: domain Description: PRK11712 Location: 1331514-1332 978 bp Feature: gene Location: 2725255-2726529 bp Ori: QKL67225.1 Feature: domain Description: ParB_N_like_MT Location: 2725297-2725558 bp Feature: domain Description: ParB_N_like_MT Location: 2 72 52 97-2 72 5558 bp Feature: domain Description: YhdJ Location: 2725726-2726449 bp Feature: domain Description: YhdJ Location: 2 72 572 6-2 72 6449 bp Feature: gene Location: 2726526-2727929 bp Ori: QKL67226.1 Feature: domain Description: ParB_N_like_MT Location: 2726553-2726808 bp Feature: domain Description: ParB_N_like_MT Location: 2 72 6553-2 72 6808 bp Feature: domain Description: YhdJ Location: 2727018-2727846 bp Feature: domain Description: YhdJ Location: 2 72 7018-2 72 7846 bp Feature: gene Location: 2728156-2729394 bp Ori: QKL67227.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728360-2729017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 8360-2 72 9017 bp Feature: domain Description: GIIM Note: maturase Location: 2729098-2729308 bp Feature: domain Description: GIIM Note: maturase Location: 2 72 9098-2 72 9308 bp Feature: gene Location: 2729829-2729978 bp Feature: gene Location: 2730238-2730645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4007 (pfam13182), RVT-GII, Arm-DNA-bind_3 (pfam13356), GlutR_N (pfam05201), INT_P4_C (cd00801), PRK11712 (ribonuclease G; Provisional), ParB_N_like_MT (cd16844), YhdJ (COG0863), GIIM (pfam08388)