myRT

myRT report for GCA_013315735.1_ASM1331573v1

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Seq: CP054368.1 Escherichia coli strain SCU-115 chromosome, complete genome (4902569 bp)
Overview 1 RT 1: 495622-500594 bp 2 RT 2: 4330029-4333198 bp Neighborhood of RT #1 [495622, 500594] PHA02517 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [4330029, 4333200] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 495622-495942 bp Ori: QKM99517.1 Feature: domain Description: PHA02517 Location: 495631-495934 bp Feature: domain Description: PHA0251 7 Location: 495631 -495934 bp Feature: gene Location: 496051-496512 bp Feature: domain Description: PHA02517 Location: 496054-496504 bp Feature: domain Description: PHA0251 7 Location: 496054-496504 bp Feature: gene Location: 496593-498101 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 496851-497583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 496851 -497583 bp Feature: domain Description: GIIM Note: maturase Location: 497658-497877 bp Feature: domain Description: GIIM Note: maturase Location: 497658-497877 bp Feature: gene Location: 498774-499471 bp Feature: domain Description: InsE Location: 498804-499068 bp Feature: domain Description: InsE Location: 498804-499068 bp Feature: gene Location: 499756-500594 bp Feature: gene Location: 4330029-4330247 bp Ori: QKN02863.1 Feature: domain Description: PRK09678 Location: 4330032-4330230 bp Feature: domain Description: PRK09678 Location: 4330032-4330230 bp Feature: gene Location: 4330509-4330682 bp Feature: gene Location: 4330651-4331424 bp Ori: QKN02865.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4330786-4331239 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 4330786-4331 239 bp Feature: gene Location: 4332110-4332592 bp Ori: QKN02866.1 Gene: smpB Feature: domain Description: SmpB Location: 4332140-4332587 bp Feature: domain Description: SmpB Location: 43321 40-4332587 bp Feature: gene Location: 4332724-4333200 bp Ori: QKN02867.1 Gene: ratA Feature: domain Description: PRK10724 Location: 4332730-4333198 bp Feature: domain Description: PRK1 0724 Location: 4332730-43331 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)