myRT

myRT report for GCA_013315875.1_ASM1331587v1

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Seq: CP054319.1 Escherichia coli strain SCU-390 chromosome, complete genome (5002622 bp)
Overview 1 RT 1: 1753425-1759825 bp Neighborhood of RT #1 [1753425, 1759851] YesN YesN YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 1753425-1754480 bp Ori: QKN33631.1 Feature: domain Description: YesN Location: 1753428-1753818 bp Feature: domain Description: YesN Location: 1 753428-1 75381 8 bp Feature: domain Description: YesN Location: 1754160-1754457 bp Feature: domain Description: YesN Location: 1 7541 60-1 754457 bp Feature: gene Location: 1754497-1755726 bp Ori: QKN33632.1 Feature: domain Description: YesM Location: 1754977-1755718 bp Feature: domain Description: YesM Location: 1 754977-1 75571 8 bp Feature: gene Location: 1756319-1756840 bp Ori: QKN33633.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1756325-1756607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 756325-1 756607 bp Feature: domain Description: GIIM Note: maturase Location: 1756655-1756835 bp Feature: domain Description: GIIM Note: maturase Location: 1 756655-1 756835 bp Feature: gene Location: 1757016-1757407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1757346-1757406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 757346-1 757406 bp Feature: gene Location: 1757893-1758797 bp Feature: gene Location: 1758934-1759851 bp Ori: QKN33634.1 Feature: domain Description: PFLE_PFLC Location: 1758970-1759825 bp Feature: domain Description: PFLE_PFLC Location: 1 758970-1 759825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: CP054321.1 Escherichia coli strain SCU-390 plasmid pSCU-390-1, complete sequence (90702 bp)
Overview 1 RT 1: 80590-84781 bp Neighborhood of RT #1 [80590, 84781] InsE PHA02517 RVT-GII GIIM InsE Feature: gene Location: 80590-80994 bp Ori: QKN36137.1 Feature: domain Description: InsE Location: 80620-80956 bp Feature: domain Description: InsE Location: 8062 0-80956 bp Feature: gene Location: 81023-81406 bp Feature: domain Description: PHA02517 Location: 81029-81362 bp Feature: domain Description: PHA02 517 Location: 8102 9-81362 bp Feature: gene Location: 81496-83004 bp Ori: QKN36148.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81754-82486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81754-82 486 bp Feature: domain Description: GIIM Note: maturase Location: 82561-82759 bp Feature: domain Description: GIIM Note: maturase Location: 82 561-82 759 bp Feature: gene Location: 83678-84419 bp Feature: domain Description: InsE Location: 83681-84011 bp Feature: domain Description: InsE Location: 83681-84011 bp Feature: gene Location: 84521-84781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)