myRT

myRT report for GCA_013340745.1_ASM1334074v1

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Seq: CP050183.1 Bacillus thuringiensis strain HER1410 chromosome, complete genome (5585577 bp)
Overview 1 RT 1: 563941-569654 bp 2 RT 2: 2419092-2427212 bp 3 RT 3: 3587477-3593887 bp 4 RT 4: 4410788-4414423 bp 5 RT 5: 4768463-4773841 bp 6 RT 6: 4936717-4940785 bp Neighborhood of RT #1 [563941, 569692] Methyltransf_25 gly_Cac_T_rel RVT-GII HNHc gly_Cac_T_rel TDH_SDR_e Neighborhood of RT #2 [2419092, 2427232] Ere-like Lysozyme_like RVT-GII HNHc CwlT_like RVT-GII COG4584 PRK09183 Neighborhood of RT #3 [3587477, 3593892] GltS_FMN OYE_like_FMN RVT-GII HNHc FadH CdnL Neighborhood of RT #4 [4410788, 4414423] RVT-GII Intron_maturas2 HNHc Neighborhood of RT #5 [4768463, 4773963] PDDEXK_2 RVT_N RVT-GII GIIM HNHc PDDEXK_2 DEDD_Tnp_IS110 COG3547 Neighborhood of RT #6 [4936717, 4940967] SUKH_6 RVT-GII GIIM SUKH_6 DUF4304 Feature: gene Location: 563941-564672 bp Ori: QKO31714.1 Feature: domain Description: Methyltransf_25 Location: 564088-564361 bp Feature: domain Description: Methyltransf_25 Location: 564088-564361 bp Feature: gene Location: 564886-565725 bp Feature: domain Description: gly_Cac_T_rel Location: 564916-565726 bp Feature: domain Description: gly_Cac_T_rel Location: 56491 6-565726 bp Feature: gene Location: 565825-567630 bp Ori: QKO31715.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566119-566815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5661 1 9-56681 5 bp Feature: domain Description: HNHc Note: nucleases Location: 567376-567514 bp Feature: domain Description: HNHc Note: nucleases Location: 567376-56751 4 bp Feature: gene Location: 568335-568682 bp Feature: domain Description: gly_Cac_T_rel Location: 568338-568680 bp Feature: domain Description: gly_Cac_T_rel Location: 568338-568680 bp Feature: gene Location: 568727-569692 bp Ori: QKO31716.1 Feature: domain Description: TDH_SDR_e Location: 568736-569654 bp Feature: domain Description: TDH_SDR_e Location: 568736-569654 bp Feature: gene Location: 2419092-2419854 bp Feature: domain Description: Ere-like Location: 2419116-2419452 bp Feature: domain Description: Ere-like Location: 241 91 1 6-241 9452 bp Feature: gene Location: 2420306-2420572 bp Feature: domain Description: Lysozyme_like Location: 2420441-2420573 bp Feature: domain Description: Lysozyme_like Location: 2420441 -2420573 bp Feature: gene Location: 2421276-2423081 bp Ori: QKO33408.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2421570-2422266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2421 570-2422266 bp Feature: domain Description: HNHc Note: nucleases Location: 2422827-2422965 bp Feature: domain Description: HNHc Note: nucleases Location: 2422827-2422965 bp Feature: gene Location: 2423179-2423493 bp Feature: domain Description: CwlT_like Location: 2423185-2423482 bp Feature: domain Description: CwlT_like Location: 24231 85-2423482 bp Feature: gene Location: 2424070-2425104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2424334-2425105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2424334-24251 05 bp Feature: gene Location: 2425195-2426490 bp Ori: QKO33409.1 Feature: domain Description: COG4584 Location: 2425609-2425999 bp Feature: domain Description: COG4584 Location: 2425609-2425999 bp Feature: gene Location: 2426480-2427232 bp Ori: QKO33410.1 Feature: domain Description: PRK09183 Location: 2426486-2427212 bp Feature: domain Description: PRK091 83 Location: 2426486-242721 2 bp Feature: gene Location: 3587477-3589051 bp Ori: QKO34441.1 Feature: domain Description: GltS_FMN Location: 3587624-3588986 bp Feature: domain Description: GltS_FMN Location: 3587624-3588986 bp Feature: gene Location: 3589119-3590030 bp Feature: domain Description: OYE_like_FMN Location: 3589125-3590001 bp Feature: domain Description: OYE_like_FMN Location: 35891 25-3590001 bp Feature: gene Location: 3590130-3591935 bp Ori: QKO34442.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3590424-3591120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3590424-3591 1 20 bp Feature: domain Description: HNHc Note: nucleases Location: 3591681-3591819 bp Feature: domain Description: HNHc Note: nucleases Location: 3591 681 -3591 81 9 bp Feature: gene Location: 3592598-3592852 bp Ori: QKO34443.1 Feature: domain Description: FadH Location: 3592685-3592817 bp Feature: domain Description: FadH Location: 3592685-359281 7 bp Feature: gene Location: 3593416-3593892 bp Ori: QKO34444.1 Feature: domain Description: CdnL Location: 3593434-3593887 bp Feature: domain Description: CdnL Location: 3593434-3593887 bp Feature: gene Location: 4410788-4410982 bp Feature: gene Location: 4411023-4411514 bp Feature: gene Location: 4411629-4413452 bp Ori: QKO35263.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4411893-4412727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 1 893-441 2727 bp Feature: domain Description: Intron_maturas2 Location: 4412799-4413144 bp Feature: domain Description: Intron_maturas2 Location: 441 2799-441 31 44 bp Feature: domain Description: HNHc Note: nucleases Location: 4413273-4413429 bp Feature: domain Description: HNHc Note: nucleases Location: 441 3273-441 3429 bp Feature: gene Location: 4414029-4414178 bp Feature: gene Location: 4414226-4414423 bp Feature: gene Location: 4768463-4769134 bp Feature: gene Location: 4769259-4769597 bp Feature: domain Description: PDDEXK_2 Location: 4769355-4769586 bp Feature: domain Description: PDDEXK_2 Location: 4769355-4769586 bp Feature: gene Location: 4770178-4772004 bp Ori: QKO36549.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4770226-4770469 bp Feature: domain Description: RVT_N Location: 4770226-4770469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4770526-4771195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4770526-4771 1 95 bp Feature: domain Description: GIIM Note: maturase Location: 4771255-4771489 bp Feature: domain Description: GIIM Note: maturase Location: 4771 255-4771 489 bp Feature: domain Description: HNHc Note: nucleases Location: 4771687-4771855 bp Feature: domain Description: HNHc Note: nucleases Location: 4771 687-4771 855 bp Feature: gene Location: 4771979-4772590 bp Feature: domain Description: PDDEXK_2 Location: 4772084-4772561 bp Feature: domain Description: PDDEXK_2 Location: 4772084-4772561 bp Feature: gene Location: 4772734-4773963 bp Ori: QKO35627.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 4772749-4773229 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 4772749-4773229 bp Feature: domain Description: COG3547 Location: 4773463-4773841 bp Feature: domain Description: COG3547 Location: 4773463-4773841 bp Feature: gene Location: 4936717-4936971 bp Feature: gene Location: 4937061-4937189 bp Feature: domain Description: SUKH_6 Location: 4937118-4937190 bp Feature: domain Description: SUKH_6 Location: 49371 1 8-49371 90 bp Feature: gene Location: 4937420-4939294 bp Ori: QKO35783.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4937720-4938425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4937720-4938425 bp Feature: domain Description: GIIM Note: maturase Location: 4938539-4938707 bp Feature: domain Description: GIIM Note: maturase Location: 4938539-4938707 bp Feature: gene Location: 4940001-4940342 bp Feature: domain Description: SUKH_6 Location: 4940004-4940307 bp Feature: domain Description: SUKH_6 Location: 4940004-4940307 bp Feature: gene Location: 4940329-4940967 bp Ori: QKO36555.1 Feature: domain Description: DUF4304 Location: 4940383-4940785 bp Feature: domain Description: DUF4304 Location: 4940383-4940785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), gly_Cac_T_rel (TIGR01825), RVT-GII, HNHc (smart00507), TDH_SDR_e (cd05272), Ere-like (cd14728), Lysozyme_like (pfam13702), CwlT_like, COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional)
GltS_FMN (cd02808), OYE_like_FMN (cd02933), FadH (COG1902), CdnL (COG1329), Intron_maturas2 (pfam01348), PDDEXK_2 (pfam12784), RVT_N (pfam13655), GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), COG3547 (Transposase )
SUKH_6 (pfam14568), DUF4304 (pfam14137)

Seq: CP050184.1 Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence (368179 bp)
Overview 1 RT 1: 274419-289829 bp Neighborhood of RT #1 [274419, 290008] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 274419-274892 bp Feature: gene Location: 274910-276055 bp Feature: gene Location: 276656-278479 bp Ori: QKO36771.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276926-277754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7692 6-2 77754 bp Feature: domain Description: Intron_maturas2 Location: 277826-278144 bp Feature: domain Description: Intron_maturas2 Location: 2 7782 6-2 78144 bp Feature: domain Description: HNHc Note: nucleases Location: 278297-278450 bp Feature: domain Description: HNHc Note: nucleases Location: 2 782 97-2 78450 bp Feature: gene Location: 278591-278764 bp Feature: gene Location: 279446-281236 bp Ori: QKO36772.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279743-280439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 79743-2 80439 bp Feature: domain Description: HNHc Note: nucleases Location: 280979-281111 bp Feature: domain Description: HNHc Note: nucleases Location: 2 80979-2 81111 bp Feature: gene Location: 281302-281571 bp Feature: gene Location: 282163-283980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282433-283255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 433-2 832 55 bp Feature: domain Description: Intron_maturas2 Location: 283336-283630 bp Feature: domain Description: Intron_maturas2 Location: 2 83336-2 83630 bp Feature: domain Description: HNHc Note: nucleases Location: 283777-283951 bp Feature: domain Description: HNHc Note: nucleases Location: 2 83777-2 83951 bp Feature: gene Location: 284959-286833 bp Ori: QKO36774.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285259-285964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 852 59-2 85964 bp Feature: domain Description: GIIM Note: maturase Location: 286078-286246 bp Feature: domain Description: GIIM Note: maturase Location: 2 86078-2 862 46 bp Feature: gene Location: 287066-288766 bp Ori: QKO36775.1 Feature: domain Description: TraG-D_C Location: 287078-287396 bp Feature: domain Description: TraG-D_C Location: 2 87078-2 87396 bp Feature: domain Description: Ftsk_gamma Location: 287756-287936 bp Feature: domain Description: Ftsk_gamma Location: 2 87756-2 87936 bp Feature: domain Description: Ftsk_gamma Location: 288089-288263 bp Feature: domain Description: Ftsk_gamma Location: 2 88089-2 882 63 bp Feature: gene Location: 289025-290008 bp Ori: QKO36776.1 Feature: domain Description: rpsA Location: 289292-289829 bp Feature: domain Description: rpsA Location: 2 892 92 -2 8982 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)