myRT

myRT report for GCA_013341355.1_ASM1334135v1

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Seq: CP054454.1 Escherichia coli strain SCU-487 chromosome, complete genome (4964641 bp)
Overview 1 RT 1: 4727370-4733767 bp Neighborhood of RT #1 [4727370, 4733790] PFLE_PFLC RVT-GII RVT-GII GIIM YesN YesN Feature: gene Location: 4727370-4728287 bp Ori: QKP97763.1 Feature: domain Description: PFLE_PFLC Location: 4727406-4728261 bp Feature: domain Description: PFLE_PFLC Location: 4727406-4728261 bp Feature: gene Location: 4728424-4729329 bp Feature: gene Location: 4729816-4730355 bp Ori: QKP97765.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4730146-4730224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47301 46-4730224 bp Feature: gene Location: 4730383-4730904 bp Ori: QKP97766.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4730389-4730671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4730389-4730671 bp Feature: domain Description: GIIM Note: maturase Location: 4730719-4730899 bp Feature: domain Description: GIIM Note: maturase Location: 473071 9-4730899 bp Feature: gene Location: 4731488-4732718 bp Feature: gene Location: 4732735-4733790 bp Ori: QKP97767.1 Feature: domain Description: YesN Location: 4732738-4733128 bp Feature: domain Description: YesN Location: 4732738-47331 28 bp Feature: domain Description: YesN Location: 4733470-4733767 bp Feature: domain Description: YesN Location: 4733470-4733767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesN (COG4753)

Seq: CP054455.1 Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence (140765 bp)
Overview 1 RT 1: 107282-111491 bp Neighborhood of RT #1 [107282, 111491] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107282-107515 bp Ori: QKP98192.1 Feature: domain Description: DUF905 Location: 107312-107510 bp Feature: domain Description: DUF905 Location: 107312 -107510 bp Feature: gene Location: 107478-108068 bp Ori: QKP98212.1 Feature: domain Description: PRK13732 Location: 107481-107967 bp Feature: domain Description: PRK13732 Location: 107481-107967 bp Feature: gene Location: 108218-110119 bp Ori: QKP98193.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108485-109316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108485-109316 bp Feature: domain Description: Intron_maturas2 Location: 109430-109688 bp Feature: domain Description: Intron_maturas2 Location: 109430-109688 bp Feature: domain Description: HNHc Note: nucleases Location: 109862-110024 bp Feature: domain Description: HNHc Note: nucleases Location: 109862 -11002 4 bp Feature: gene Location: 110802-111002 bp Feature: gene Location: 111072-111491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)