myRT

myRT report for GCA_013342925.1_ASM1334292v1

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Seq: CP054556.1 Escherichia coli strain LWY24 chromosome, complete genome (4955271 bp)
Overview 1 RT 1: 2698-4881 bp 2 RT 2: 1124662-1129315 bp Neighborhood of RT #1 [2698, 4881] HTH_XRE RVT-Retrons Neighborhood of RT #2 [1124662, 1129739] DcuC RVT-GII Asparaginase_2 InsA Feature: gene Location: 2698-2853 bp Feature: gene Location: 2890-3198 bp Ori: QKQ15325.1 Feature: domain Description: HTH_XRE Location: 2902-3067 bp Feature: domain Description: HTH_XRE Location: 2902-3067 bp Feature: gene Location: 3176-4126 bp Ori: QKQ15326.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3356-3899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3356-3899 bp Feature: gene Location: 4251-4688 bp Feature: gene Location: 4687-4881 bp Feature: gene Location: 1124662-1126023 bp Ori: QKQ16358.1 Gene: dcuC Feature: domain Description: DcuC Location: 1124665-1125997 bp Feature: domain Description: DcuC Location: 1 1 24665-1 1 25997 bp Feature: gene Location: 1126076-1126303 bp Feature: gene Location: 1126669-1127115 bp Ori: QKQ16360.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1126975-1127077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 26975-1 1 27077 bp Feature: gene Location: 1127639-1128670 bp Ori: QKQ16361.1 Feature: domain Description: Asparaginase_2 Location: 1127729-1128662 bp Feature: domain Description: Asparaginase_2 Location: 1 1 27729-1 1 28662 bp Feature: gene Location: 1129042-1129739 bp Feature: domain Description: InsA Location: 1129048-1129315 bp Feature: domain Description: InsA Location: 1 1 29048-1 1 2931 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), InsA (COG3677)