myRT

myRT report for GCA_013343135.1_ASM1334313v1

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Seq: CP054571.1 Achromobacter xylosoxidans strain FDAARGOS_789 chromosome, complete genome (6806438 bp)
Overview 1 RT 1: 5175598-5186237 bp Neighborhood of RT #1 [5175598, 5186237] RVT_N RVT-GII GIIM HNH DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0390 SF2_C_SNF Feature: gene Location: 5175598-5175858 bp Feature: gene Location: 5175935-5176582 bp Feature: gene Location: 5177310-5179025 bp Ori: QKQ55842.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5177367-5177610 bp Feature: domain Description: RVT_N Location: 51 77367-51 7761 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5177655-5178300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 77655-51 78300 bp Feature: domain Description: GIIM Note: maturase Location: 5178357-5178588 bp Feature: domain Description: GIIM Note: maturase Location: 51 78357-51 78588 bp Feature: domain Description: HNH Note: nucleases Location: 5178846-5178981 bp Feature: domain Description: HNH Note: nucleases Location: 51 78846-51 78981 bp Feature: gene Location: 5179093-5180169 bp Feature: gene Location: 5180216-5180542 bp Feature: gene Location: 5180620-5180919 bp Feature: gene Location: 5181032-5182072 bp Feature: domain Description: DEXHc_Snf Location: 5181257-5181524 bp Feature: domain Description: DEXHc_Snf Location: 51 81 257-51 81 524 bp Feature: gene Location: 5182692-5184410 bp Ori: QKQ55845.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5182749-5182986 bp Feature: domain Description: RVT_N Location: 51 82749-51 82986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5183037-5183685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 83037-51 83685 bp Feature: domain Description: GIIM Note: maturase Location: 5183742-5183973 bp Feature: domain Description: GIIM Note: maturase Location: 51 83742-51 83973 bp Feature: domain Description: HNHc Note: nucleases Location: 5184207-5184363 bp Feature: domain Description: HNHc Note: nucleases Location: 51 84207-51 84363 bp Feature: gene Location: 5184493-5185734 bp Feature: domain Description: KOG0390 Location: 5184505-5184634 bp Feature: domain Description: KOG0390 Location: 51 84505-51 84634 bp Feature: domain Description: SF2_C_SNF Location: 5185189-5185570 bp Feature: domain Description: SF2_C_SNF Location: 51 851 89-51 85570 bp Feature: gene Location: 5186013-5186237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DEXHc_Snf (cd17919), HNHc (smart00507), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), SF2_C_SNF (cd18793)