myRT

myRT report for GCA_013344545.1_ASM1334454v1

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Seq: AP020332.1 Salmonella enterica SESen3709 DNA, complete genome (4781872 bp)
Overview 1 RT 1: 4244934-4250745 bp 2 RT 2: 4772014-4776765 bp Neighborhood of RT #1 [4244934, 4250750] DUF4156 RVT_N RVT-GII GIIM HNHc groEL groES Neighborhood of RT #2 [4772014, 4776827] PRK10473 RVT-Retrons INT_P4_C Feature: gene Location: 4244934-4245287 bp Ori: BBN79124.1 Feature: domain Description: DUF4156 Location: 4245003-4245279 bp Feature: domain Description: DUF41 56 Location: 4245003-4245279 bp Feature: gene Location: 4245650-4245973 bp Feature: gene Location: 4245978-4247675 bp Ori: BBN79126.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4246041-4246275 bp Feature: domain Description: RVT_N Location: 4246041 -4246275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4246329-4246974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4246329-4246974 bp Feature: domain Description: GIIM Note: maturase Location: 4247028-4247259 bp Feature: domain Description: GIIM Note: maturase Location: 4247028-4247259 bp Feature: domain Description: HNHc Note: nucleases Location: 4247469-4247625 bp Feature: domain Description: HNHc Note: nucleases Location: 4247469-4247625 bp Feature: gene Location: 4248767-4250413 bp Ori: BBN79127.1 Gene: groL Feature: domain Description: groEL Location: 4248773-4250399 bp Feature: domain Description: groEL Location: 4248773-4250399 bp Feature: gene Location: 4250457-4250750 bp Ori: BBN79128.1 Gene: groS Feature: domain Description: groES Location: 4250460-4250745 bp Feature: domain Description: groES Location: 4250460-4250745 bp Feature: gene Location: 4772014-4773201 bp Ori: BBN79575.1 Gene: mdtL_2 Feature: domain Description: PRK10473 Location: 4772017-4773193 bp Feature: domain Description: PRK1 0473 Location: 477201 7-47731 93 bp Feature: gene Location: 4773986-4774147 bp Feature: gene Location: 4774095-4775030 bp Ori: BBN79577.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4774206-4774791 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4774206-4774791 bp Feature: gene Location: 4775030-4775992 bp Feature: gene Location: 4776552-4776827 bp Ori: BBN79579.1 Gene: intA_5 Feature: domain Description: INT_P4_C Location: 4776555-4776765 bp Feature: domain Description: INT_P4_C Location: 4776555-4776765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533), PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons, INT_P4_C (cd00801)