myRT

myRT report for GCA_013344685.1_ASM1334468v1

Download annotations/find similar RTs

Seq: CP050137.1 Sphingomonas sp. CL5.1 chromosome, complete genome (4441086 bp)
Overview 1 RT 1: 65779-71424 bp 2 RT 2: 3112885-3119695 bp Neighborhood of RT #1 [65779, 71480] RVT-Retrons HTH_XRE TraD Neighborhood of RT #2 [3112885, 3119712] ExoI_N sbcB YafV RVT-UG6 dnaG dnaG Feature: gene Location: 65779-67446 bp Feature: gene Location: 67451-69061 bp Feature: gene Location: 69099-70070 bp Ori: QKR98282.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69261-69768 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69261 -69768 bp Feature: gene Location: 70027-70356 bp Ori: QKR98283.1 Feature: domain Description: HTH_XRE Location: 70042-70204 bp Feature: domain Description: HTH_XRE Location: 70042-70204 bp Feature: gene Location: 71229-71480 bp Ori: QKR98284.1 Feature: domain Description: TraD Location: 71235-71424 bp Feature: domain Description: TraD Location: 71 235-71 424 bp Feature: gene Location: 3112885-3114249 bp Ori: QKS00787.1 Feature: domain Description: ExoI_N Location: 3112894-3113443 bp Feature: domain Description: ExoI_N Location: 31 1 2894-31 1 3443 bp Feature: domain Description: sbcB Note: exonuclease Location: 3113704-3114133 bp Feature: domain Description: sbcB Note: exonuclease Location: 31 1 3704-31 1 41 33 bp Feature: gene Location: 3114520-3115428 bp Ori: QKS00788.1 Feature: domain Description: YafV Location: 3114616-3115222 bp Feature: domain Description: YafV Location: 31 1 461 6-31 1 5222 bp Feature: gene Location: 3115418-3118360 bp Ori: QKS00789.1 Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 3115742-3116177 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 31 1 5742-31 1 61 77 bp Feature: gene Location: 3118397-3118678 bp Feature: gene Location: 3118675-3119712 bp Ori: QKS00791.1 Feature: domain Description: dnaG Location: 3118681-3118846 bp Feature: domain Description: dnaG Location: 31 1 8681 -31 1 8846 bp Feature: domain Description: dnaG Location: 3119035-3119695 bp Feature: domain Description: dnaG Location: 31 1 9035-31 1 9695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), TraD (pfam06412), ExoI_N (cd06138), sbcB (PRK11779), YafV (COG0388), RVT-UG6, dnaG (TIGR01391)