myRT

myRT report for GCA_013347125.1_ASM1334712v1

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Seq: CP054599.1 Sulfitobacter pseudonitzschiae strain H46 chromosome, complete genome (3891549 bp)
Overview 1 RT 1: 3070020-3077568 bp Neighborhood of RT #1 [3070020, 3077588] zinc_ribbon_4 RVT-Retrons DUF4175 lysA Feature: gene Location: 3070020-3070811 bp Ori: QKS09786.1 Feature: domain Description: zinc_ribbon_4 Location: 3070023-3070128 bp Feature: domain Description: zinc_ribbon_4 Location: 3070023-30701 28 bp Feature: gene Location: 3071505-3072242 bp Feature: gene Location: 3072377-3073351 bp Ori: QKS09788.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3072560-3073088 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3072560-3073088 bp Feature: gene Location: 3073682-3076270 bp Ori: QKS09789.1 Feature: domain Description: DUF4175 Location: 3073772-3076262 bp Feature: domain Description: DUF41 75 Location: 3073772-3076262 bp Feature: gene Location: 3076323-3077588 bp Ori: QKS09790.1 Gene: lysA Feature: domain Description: lysA Location: 3076344-3077568 bp Feature: domain Description: lysA Location: 3076344-3077568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zinc_ribbon_4 (pfam13717), RVT-Retrons, DUF4175 (pfam13779), lysA (TIGR01048)

Seq: CP054605.1 Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed6, complete sequence (23927 bp)
Overview 1 RT 1: 17282-20230 bp Neighborhood of RT #1 [17282, 20230] HipB RVT-Retrons TIR_2 Feature: gene Location: 17282-17449 bp Feature: gene Location: 17496-17801 bp Ori: QKS11340.1 Feature: domain Description: HipB Location: 17499-17739 bp Feature: domain Description: HipB Location: 17499-17739 bp Feature: gene Location: 17798-18688 bp Ori: QKS11341.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17954-18476 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17954-18476 bp Feature: gene Location: 18708-19673 bp Ori: QKS11342.1 Feature: domain Description: TIR_2 Location: 18720-19008 bp Feature: domain Description: TIR_2 Location: 1872 0-19008 bp Feature: gene Location: 19724-20230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-Retrons, TIR_2 (pfam13676)