myRT

myRT report for GCA_013347265.1_ASM1334726v1

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Seq: CP054613.1 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence (2697188 bp)
Overview 1 RT 1: 1183180-1189666 bp Neighborhood of RT #1 [1183180, 1189701] DDE_Tnp_1 RVT-GII LolD Feature: gene Location: 1183180-1183683 bp Ori: QKS47530.1 Feature: domain Description: DDE_Tnp_1 Location: 1183255-1183471 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 83255-1 1 83471 bp Feature: gene Location: 1183629-1184027 bp Feature: gene Location: 1184313-1185574 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1184508-1185090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 84508-1 1 85090 bp Feature: gene Location: 1186599-1189022 bp Feature: gene Location: 1189003-1189701 bp Ori: QKS47532.1 Feature: domain Description: LolD Location: 1189018-1189666 bp Feature: domain Description: LolD Location: 1 1 8901 8-1 1 89666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, LolD (COG1136)

Seq: CP054612.1 Paenibacillus cellulosilyticus strain KACC 14175 chromosome, complete genome (3839798 bp)
Overview 1 RT 1: 212075-221127 bp Neighborhood of RT #1 [212075, 221411] HflC BID_2 Big_4 RGL11 CBM_X2 SLH SLH SLH RVT-GII GIIM AcpP UbiG Feature: gene Location: 212075-213118 bp Ori: QKS43673.1 Feature: domain Description: HflC Location: 212108-212792 bp Feature: domain Description: HflC Location: 2 12 108-2 12 792 bp Feature: gene Location: 213517-218727 bp Ori: QKS43674.1 Feature: domain Description: BID_2 Location: 214375-214597 bp Feature: domain Description: BID_2 Location: 2 14375-2 14597 bp Feature: domain Description: Big_4 Location: 215452-215614 bp Feature: domain Description: Big_4 Location: 2 15452 -2 15614 bp Feature: domain Description: RGL11 Location: 215719-217612 bp Feature: domain Description: RGL11 Location: 2 15719-2 17612 bp Feature: domain Description: CBM_X2 Location: 217717-217966 bp Feature: domain Description: CBM_X2 Location: 2 17717-2 17966 bp Feature: domain Description: SLH Location: 218191-218317 bp Feature: domain Description: SLH Location: 2 18191-2 18317 bp Feature: domain Description: SLH Location: 218371-218497 bp Feature: domain Description: SLH Location: 2 18371-2 18497 bp Feature: domain Description: SLH Location: 218548-218662 bp Feature: domain Description: SLH Location: 2 18548-2 18662 bp Feature: gene Location: 218892-220152 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219090-219522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 19090-2 1952 2 bp Feature: domain Description: GIIM Note: maturase Location: 219756-219867 bp Feature: domain Description: GIIM Note: maturase Location: 2 19756-2 19867 bp Feature: gene Location: 220369-220620 bp Ori: QKS43675.1 Feature: domain Description: AcpP Location: 220432-220600 bp Feature: domain Description: AcpP Location: 2 2 0432 -2 2 0600 bp Feature: gene Location: 220641-221411 bp Ori: QKS43676.1 Feature: domain Description: UbiG Location: 220797-221127 bp Feature: domain Description: UbiG Location: 2 2 0797-2 2 112 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HflC (COG0330), BID_2 (smart00635), Big_4 (pfam07532), RGL11 (cl22850), CBM_X2 (pfam03442), SLH (pfam00395), RVT-GII, GIIM (pfam08388), AcpP (COG0236), UbiG (TIGR01983)