myRT

myRT report for GCA_013357725.1_ASM1335772v1

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Seq: CP053805.1 Vibrio cholerae strain SL6Y chromosome 2, complete sequence (1143503 bp)
Overview 1 RT 1: 574686-577734 bp Neighborhood of RT #1 [574686, 577748] YafQ DUF3265 RVT-UG7 YqfO Feature: gene Location: 574686-574955 bp Ori: QKU87656.1 Feature: domain Description: YafQ Location: 574689-574953 bp Feature: domain Description: YafQ Location: 574689-574953 bp Feature: gene Location: 574983-575093 bp Ori: QKU88141.1 Feature: domain Description: DUF3265 Location: 575010-575091 bp Feature: domain Description: DUF3265 Location: 57501 0-575091 bp Feature: gene Location: 575090-576628 bp Ori: QKU87657.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 575462-575882 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 575462-575882 bp Feature: gene Location: 576768-577268 bp Feature: gene Location: 577425-577748 bp Ori: QKU87659.1 Feature: domain Description: YqfO Location: 577428-577734 bp Feature: domain Description: YqfO Location: 577428-577734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafQ (COG3041), DUF3265 (pfam11665), RVT-UG7, YqfO (COG3323)

Seq: CP053804.1 Vibrio cholerae strain SL6Y chromosome 1, complete sequence (2900064 bp)
Overview 1 RT 1: 252408-258013 bp Neighborhood of RT #1 [252408, 258013] groEL RVT_N RVT-GII GIIM HNHc DUF2188 Feature: gene Location: 252408-254042 bp Ori: QKU84823.1 Gene: groL Feature: domain Description: groEL Location: 252414-254037 bp Feature: domain Description: groEL Location: 2 52 414-2 54037 bp Feature: gene Location: 254770-254949 bp Feature: gene Location: 255163-256821 bp Ori: QKU84825.1 Gene: ltrA Feature: domain Description: RVT_N Location: 255208-255451 bp Feature: domain Description: RVT_N Location: 2 552 08-2 55451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255496-256141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 55496-2 56141 bp Feature: domain Description: GIIM Note: maturase Location: 256192-256426 bp Feature: domain Description: GIIM Note: maturase Location: 2 56192 -2 5642 6 bp Feature: domain Description: HNHc Note: nucleases Location: 256639-256795 bp Feature: domain Description: HNHc Note: nucleases Location: 2 56639-2 56795 bp Feature: gene Location: 256899-257129 bp Ori: QKU87024.1 Feature: domain Description: DUF2188 Location: 256917-257094 bp Feature: domain Description: DUF2 188 Location: 2 56917-2 57094 bp Feature: gene Location: 257453-258013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF2188 (pfam09954)