myRT

myRT report for GCA_013357765.1_ASM1335776v1

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Seq: CP053809.1 Vibrio cholerae strain SP7G chromosome 2, complete sequence (1217051 bp)
Overview 1 RT 1: 416144-419558 bp 2 RT 2: 975114-981238 bp Neighborhood of RT #1 [416144, 419566] DUF645 PRK10119 RVT-UG12 AraC_E_bind DUF3265 Neighborhood of RT #2 [975114, 981240] TIGR02646 COG3950 RVT-Retrons tdh PRK06939 Feature: gene Location: 416144-416314 bp Ori: QKU80205.1 Feature: domain Description: DUF645 Location: 416225-416312 bp Feature: domain Description: DUF645 Location: 41 6225-41 631 2 bp Feature: gene Location: 416522-417160 bp Ori: QKU80206.1 Feature: domain Description: PRK10119 Location: 416531-417146 bp Feature: domain Description: PRK1 01 1 9 Location: 41 6531 -41 71 46 bp Feature: gene Location: 417308-418864 bp Ori: QKU80207.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 417650-418094 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 41 7650-41 8094 bp Feature: gene Location: 419002-419451 bp Ori: QKU80208.1 Feature: domain Description: AraC_E_bind Location: 419011-419446 bp Feature: domain Description: AraC_E_bind Location: 41 901 1 -41 9446 bp Feature: gene Location: 419438-419566 bp Ori: QKU80209.1 Feature: domain Description: DUF3265 Location: 419486-419558 bp Feature: domain Description: DUF3265 Location: 41 9486-41 9558 bp Feature: gene Location: 975114-975887 bp Ori: QKU80678.1 Feature: domain Description: TIGR02646 Location: 975189-975717 bp Feature: domain Description: TIGR02646 Location: 9751 89-97571 7 bp Feature: gene Location: 975874-977502 bp Ori: QKU80679.1 Feature: domain Description: COG3950 Location: 976060-977440 bp Feature: domain Description: COG3950 Location: 976060-977440 bp Feature: gene Location: 977492-978436 bp Ori: QKU80680.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 977591-978188 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 977591 -9781 88 bp Feature: gene Location: 979013-980044 bp Ori: QKU80681.1 Gene: tdh Feature: domain Description: tdh Location: 979022-980042 bp Feature: domain Description: tdh Location: 979022-980042 bp Feature: gene Location: 980047-981240 bp Ori: QKU80682.1 Feature: domain Description: PRK06939 Location: 980050-981238 bp Feature: domain Description: PRK06939 Location: 980050-981 238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF645 (pfam04875), PRK10119 (putative hydrolase; Provisional), RVT-UG12, AraC_E_bind (smart00871), DUF3265 (pfam11665), TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, tdh (TIGR00692), PRK06939 (2-amino-3-ketobutyrate coenzyme A ligase; Provisional)