myRT

myRT report for GCA_013364135.1_ASM1336413v1

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Seq: CP054911.1 Pantoea ananatis strain FDAARGOS_680 plasmid unnamed3, complete sequence (218767 bp)
Overview 1 RT 1: 162531-167210 bp Neighborhood of RT #1 [162531, 167221] COG3547 PRK10276 RVT_N RVT-GII GIIM HNHc PRK10276 antidote_HigA Feature: gene Location: 162531-163550 bp Feature: domain Description: COG3547 Location: 162549-163494 bp Feature: domain Description: COG3547 Location: 1 62549-1 63494 bp Feature: gene Location: 163690-164037 bp Gene: umuD Feature: domain Description: PRK10276 Location: 163717-164008 bp Feature: domain Description: PRK1 0276 Location: 1 6371 7-1 64008 bp Feature: gene Location: 164093-165808 bp Ori: QKV86087.1 Gene: ltrA Feature: domain Description: RVT_N Location: 164147-164390 bp Feature: domain Description: RVT_N Location: 1 641 47-1 64390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164435-165086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 64435-1 65086 bp Feature: domain Description: GIIM Note: maturase Location: 165140-165371 bp Feature: domain Description: GIIM Note: maturase Location: 1 651 40-1 65371 bp Feature: domain Description: HNHc Note: nucleases Location: 165605-165761 bp Feature: domain Description: HNHc Note: nucleases Location: 1 65605-1 65761 bp Feature: gene Location: 166420-166554 bp Feature: domain Description: PRK10276 Location: 166453-166552 bp Feature: domain Description: PRK1 0276 Location: 1 66453-1 66552 bp Feature: gene Location: 166979-167221 bp Ori: QKV86088.1 Feature: domain Description: antidote_HigA Location: 166997-167210 bp Feature: domain Description: antidote_HigA Location: 1 66997-1 6721 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), antidote_HigA (TIGR02607)