myRT

myRT report for GCA_013364235.1_ASM1336423v1

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Seq: CP054919.1 Kitasatospora sp. NA04385 chromosome, complete genome (8400742 bp)
Overview 1 RT 1: 4328728-4333624 bp 2 RT 2: 8378167-8382478 bp Neighborhood of RT #1 [4328728, 4333998] Endonuclease_7 DDE_3 RVT-GII HTH_29 HTH_33 DDE_Tnp_1 Neighborhood of RT #2 [8378167, 8382672] RVT-GII GIIM HEAT_2 Feature: gene Location: 4328728-4329513 bp Ori: QKW20936.1 Feature: domain Description: Endonuclease_7 Location: 4329178-4329418 bp Feature: domain Description: Endonuclease_7 Location: 43291 78-432941 8 bp Feature: gene Location: 4329858-4330376 bp Feature: domain Description: DDE_3 Location: 4329867-4330254 bp Feature: domain Description: DDE_3 Location: 4329867-4330254 bp Feature: gene Location: 4330508-4331976 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4330850-4331135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4330850-4331 1 35 bp Feature: gene Location: 4332571-4333086 bp Feature: domain Description: HTH_29 Location: 4332634-4332811 bp Feature: domain Description: HTH_29 Location: 4332634-433281 1 bp Feature: domain Description: HTH_33 Location: 4332862-4333036 bp Feature: domain Description: HTH_33 Location: 4332862-4333036 bp Feature: gene Location: 4333153-4333998 bp Ori: QKW20937.1 Feature: domain Description: DDE_Tnp_1 Location: 4333165-4333624 bp Feature: domain Description: DDE_Tnp_1 Location: 43331 65-4333624 bp Feature: gene Location: 8378167-8378625 bp Feature: gene Location: 8378760-8378999 bp Feature: gene Location: 8379967-8381232 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8380183-8380843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83801 83-8380843 bp Feature: domain Description: GIIM Note: maturase Location: 8380927-8381143 bp Feature: domain Description: GIIM Note: maturase Location: 8380927-8381 1 43 bp Feature: gene Location: 8381327-8381515 bp Feature: gene Location: 8381653-8382672 bp Ori: QKW23968.1 Feature: domain Description: HEAT_2 Location: 8382205-8382478 bp Feature: domain Description: HEAT_2 Location: 8382205-8382478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endonuclease_7 (pfam02945), DDE_3 (pfam13358), RVT-GII, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_Tnp_1 (pfam01609), GIIM (pfam08388), HEAT_2 (pfam13646)