myRT

myRT report for GCA_013365535.1_ASM1336553v1

Download annotations/find similar RTs

Seq: CP053590.1 Aquimarina sp. TRL1 chromosome, complete genome (5351143 bp)
Overview 1 RT 1: 1026029-1034442 bp 2 RT 2: 1036843-1048047 bp Neighborhood of RT #1 [1026029, 1034453] RMtype1_S_Csp16704I_TRD2-CR2_like RMtype1_S_Csp16704I_TRD2-CR2_like RVT-UG5 COG0610 DUF45 Neighborhood of RT #2 [1036843, 1048097] RVT-GII GIIM YaaC RVT-GII GIIM RVT-GII GIIM SUKH_6 Feature: gene Location: 1026029-1027336 bp Ori: QKX04103.1 Feature: domain Description: RMtype1_S_Csp16704I_TRD2-CR2_like Location: 1026119-1026653 bp Feature: domain Description: RMtype1 _S_Csp1 6704I_TRD2-CR2_like Location: 1 0261 1 9-1 026653 bp Feature: domain Description: RMtype1_S_Csp16704I_TRD2-CR2_like Location: 1026938-1027310 bp Feature: domain Description: RMtype1 _S_Csp1 6704I_TRD2-CR2_like Location: 1 026938-1 02731 0 bp Feature: gene Location: 1027396-1027632 bp Feature: gene Location: 1027629-1030634 bp Ori: QKX04105.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1028118-1028556 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 0281 1 8-1 028556 bp Feature: gene Location: 1030636-1033752 bp Ori: QKX07533.1 Feature: domain Description: COG0610 Location: 1030657-1033642 bp Feature: domain Description: COG061 0 Location: 1 030657-1 033642 bp Feature: gene Location: 1033752-1034453 bp Ori: QKX04106.1 Feature: domain Description: DUF45 Location: 1033815-1034442 bp Feature: domain Description: DUF45 Location: 1 03381 5-1 034442 bp Feature: gene Location: 1036843-1037787 bp Feature: gene Location: 1037788-1038318 bp Feature: gene Location: 1038415-1039695 bp Ori: QKX04110.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038610-1039225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03861 0-1 039225 bp Feature: domain Description: GIIM Note: maturase Location: 1039300-1039510 bp Feature: domain Description: GIIM Note: maturase Location: 1 039300-1 03951 0 bp Feature: gene Location: 1040349-1041386 bp Ori: QKX04111.1 Feature: domain Description: YaaC Location: 1040436-1041339 bp Feature: domain Description: YaaC Location: 1 040436-1 041 339 bp Feature: gene Location: 1041476-1042756 bp Ori: QKX04112.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041671-1042286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 671 -1 042286 bp Feature: domain Description: GIIM Note: maturase Location: 1042364-1042571 bp Feature: domain Description: GIIM Note: maturase Location: 1 042364-1 042571 bp Feature: gene Location: 1043470-1044597 bp Feature: gene Location: 1044687-1045967 bp Ori: QKX04114.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1044882-1045497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 044882-1 045497 bp Feature: domain Description: GIIM Note: maturase Location: 1045572-1045782 bp Feature: domain Description: GIIM Note: maturase Location: 1 045572-1 045782 bp Feature: gene Location: 1046607-1047236 bp Feature: gene Location: 1047669-1048097 bp Ori: QKX04116.1 Feature: domain Description: SUKH_6 Location: 1047693-1048047 bp Feature: domain Description: SUKH_6 Location: 1 047693-1 048047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Csp16704I_TRD2-CR2_like (cd17285), RVT-UG5, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863), RVT-GII, GIIM (pfam08388), YaaC (pfam14175), SUKH_6 (pfam14568)