myRT

myRT report for GCA_013371745.1_ASM1337174v1

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Seq: CP055262.1 Escherichia coli strain AH62 plasmid pAH62-3, complete sequence (136694 bp)
Overview 1 RT 1: 51592-57387 bp Neighborhood of RT #1 [51592, 57392] PRK13698 RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 51592-52563 bp Ori: QKX93962.1 Feature: domain Description: PRK13698 Location: 51595-52558 bp Feature: domain Description: PRK1 3698 Location: 51 595-52558 bp Feature: gene Location: 53659-53865 bp Feature: gene Location: 54543-56444 bp Ori: QKX93964.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54810-55641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5481 0-55641 bp Feature: domain Description: Intron_maturas2 Location: 55755-56013 bp Feature: domain Description: Intron_maturas2 Location: 55755-5601 3 bp Feature: domain Description: HNHc Note: nucleases Location: 56187-56349 bp Feature: domain Description: HNHc Note: nucleases Location: 561 87-56349 bp Feature: gene Location: 56594-57091 bp Ori: QKX94044.1 Gene: ssb Feature: domain Description: PRK13732 Location: 56597-57089 bp Feature: domain Description: PRK1 3732 Location: 56597-57089 bp Feature: gene Location: 57159-57392 bp Ori: QKX93965.1 Feature: domain Description: DUF905 Location: 57189-57387 bp Feature: domain Description: DUF905 Location: 571 89-57387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: CP055259.1 Escherichia coli strain AH62 chromosome, complete genome (4799791 bp)
Overview 1 RT 1: 1049180-1055625 bp Neighborhood of RT #1 [1049180, 1055816] INT_Rci_Hp1_C INT_Rci_Hp1_C RVT-Retrons AAA_21 HTH_36 Feature: gene Location: 1049180-1050637 bp Ori: QKX90372.1 Feature: domain Description: INT_Rci_Hp1_C Location: 1049558-1049756 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1049558-1049756 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1050041-1050512 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1050041-1050512 bp Feature: gene Location: 1050649-1051227 bp Feature: gene Location: 1051436-1052539 bp Ori: QKX90374.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1051586-1052138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1051586-1052 138 bp Feature: gene Location: 1052706-1054823 bp Ori: QKX90375.1 Feature: domain Description: AAA_21 Location: 1052781-1053690 bp Feature: domain Description: AAA_2 1 Location: 1052 781-1053690 bp Feature: gene Location: 1055283-1055816 bp Ori: QKX90376.1 Feature: domain Description: HTH_36 Location: 1055469-1055625 bp Feature: domain Description: HTH_36 Location: 1055469-105562 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT-Retrons, AAA_21 (pfam13304), HTH_36 (pfam13730)