myRT

myRT report for GCA_013372065.1_ASM1337206v1

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Seq: CP049828.1 Janthinobacterium lividum strain EIF2 chromosome, complete genome (6399352 bp)
Overview 1 RT 1: 6222355-6230884 bp Neighborhood of RT #1 [6222355, 6230922] PRK10770 LptD RVT_N RVT-GII GIIM HNHc COG3178 NTP_transferase_like_1 Feature: gene Location: 6222355-6223758 bp Ori: QKY11275.1 Feature: domain Description: PRK10770 Location: 6222526-6223741 bp Feature: domain Description: PRK1 0770 Location: 6222526-6223741 bp Feature: gene Location: 6223847-6226102 bp Ori: QKY11276.1 Feature: domain Description: LptD Location: 6223901-6226016 bp Feature: domain Description: LptD Location: 6223901 -622601 6 bp Feature: gene Location: 6227245-6228948 bp Ori: QKY11277.1 Gene: ltrA Feature: domain Description: RVT_N Location: 6227305-6227548 bp Feature: domain Description: RVT_N Location: 6227305-6227548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6227593-6228241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6227593-6228241 bp Feature: domain Description: GIIM Note: maturase Location: 6228292-6228526 bp Feature: domain Description: GIIM Note: maturase Location: 6228292-6228526 bp Feature: domain Description: HNHc Note: nucleases Location: 6228760-6228910 bp Feature: domain Description: HNHc Note: nucleases Location: 6228760-622891 0 bp Feature: gene Location: 6229073-6230140 bp Ori: QKY11278.1 Feature: domain Description: COG3178 Location: 6229100-6230114 bp Feature: domain Description: COG31 78 Location: 62291 00-62301 1 4 bp Feature: gene Location: 6230203-6230922 bp Ori: QKY11279.1 Feature: domain Description: NTP_transferase_like_1 Location: 6230209-6230884 bp Feature: domain Description: NTP_transferase_like_1 Location: 6230209-6230884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)