myRT

myRT report for GCA_013372265.1_ASM1337226v1

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Seq: CP054051.1 Arcobacter cibarius strain LMG 21996 chromosome, complete genome (2336659 bp)
Overview 1 RT 1: 141352-148290 bp 2 RT 2: 218429-225869 bp Neighborhood of RT #1 [141352, 148290] dCache_3 nifL_nitrog nifL_nitrog nifL_nitrog DUF772 DDE_Tnp_1 RVT_N RVT-GII GIIM Neighborhood of RT #2 [218429, 225967] COG3943 COG3587 RVT-UG17 COG4286 Feature: gene Location: 141352-143643 bp Ori: QKJ26112.1 Feature: domain Description: dCache_3 Location: 141376-142003 bp Feature: domain Description: dCache_3 Location: 1 41 376-1 42003 bp Feature: domain Description: nifL_nitrog Location: 142189-142285 bp Feature: domain Description: nifL_nitrog Location: 1 421 89-1 42285 bp Feature: domain Description: nifL_nitrog Location: 142540-142885 bp Feature: domain Description: nifL_nitrog Location: 1 42540-1 42885 bp Feature: domain Description: nifL_nitrog Location: 142921-143563 bp Feature: domain Description: nifL_nitrog Location: 1 42921 -1 43563 bp Feature: gene Location: 143797-144984 bp Ori: QKJ26113.1 Feature: domain Description: DUF772 Location: 144016-144193 bp Feature: domain Description: DUF772 Location: 1 4401 6-1 441 93 bp Feature: domain Description: DDE_Tnp_1 Location: 144466-144949 bp Feature: domain Description: DDE_Tnp_1 Location: 1 44466-1 44949 bp Feature: gene Location: 145490-146956 bp Ori: QKJ26114.1 Feature: domain Description: RVT_N Location: 145532-145775 bp Feature: domain Description: RVT_N Location: 1 45532-1 45775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145826-146486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 45826-1 46486 bp Feature: domain Description: GIIM Note: maturase Location: 146540-146774 bp Feature: domain Description: GIIM Note: maturase Location: 1 46540-1 46774 bp Feature: gene Location: 147063-147233 bp Feature: gene Location: 147865-148290 bp Feature: gene Location: 218429-219463 bp Ori: QKJ26180.1 Feature: domain Description: COG3943 Location: 218447-219443 bp Feature: domain Description: COG3943 Location: 21 8447-21 9443 bp Feature: gene Location: 219463-222408 bp Ori: QKJ26181.1 Feature: domain Description: COG3587 Location: 219472-222403 bp Feature: domain Description: COG3587 Location: 21 9472-222403 bp Feature: gene Location: 223280-224488 bp Ori: QKJ26182.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 223472-224081 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 223472-224081 bp Feature: gene Location: 224628-225008 bp Feature: gene Location: 225188-225967 bp Ori: QKJ26184.1 Feature: domain Description: COG4286 Location: 225194-225869 bp Feature: domain Description: COG4286 Location: 2251 94-225869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dCache_3 (pfam14827), nifL_nitrog (TIGR02938), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG3943 (Uncharacterized conserved protein ), COG3587 (Restriction endonuclease ), RVT-UG17
COG4286 (Uncharacterized protein, UPF0160 family )