myRT

myRT report for GCA_013372325.1_ASM1337232v1

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Seq: CP054219.1 Escherichia coli strain EcPF18 chromosome, complete genome (5010549 bp)
Overview 1 RT 1: 4893948-4900802 bp Neighborhood of RT #1 [4893948, 4900802] PRK11388 RVT-Retrons Feature: gene Location: 4893948-4895867 bp Ori: QKY35195.1 Gene: dhaR Feature: domain Description: PRK11388 Location: 4893951-4895859 bp Feature: domain Description: PRK1 1 388 Location: 4893951 -4895859 bp Feature: gene Location: 4895904-4896080 bp Feature: gene Location: 4897159-4898916 bp Ori: QKY35197.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4897303-4897921 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4897303-4897921 bp Feature: gene Location: 4899163-4900290 bp Feature: gene Location: 4900287-4900802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons

Seq: CP054220.1 Escherichia coli strain EcPF18 plasmid p1, complete sequence (128954 bp)
Overview 1 RT 1: 12942-17130 bp 2 RT 2: 26793-29615 bp Neighborhood of RT #1 [12942, 17130] InsE PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [26793, 29807] InsE RVT-GII IS5 PRK10173 Feature: gene Location: 12942-13346 bp Ori: QKY35513.1 Feature: domain Description: InsE Location: 12972-13308 bp Feature: domain Description: InsE Location: 12 972 -13308 bp Feature: gene Location: 13375-13758 bp Feature: domain Description: PHA02517 Location: 13381-13714 bp Feature: domain Description: PHA02 517 Location: 13381-13714 bp Feature: gene Location: 13848-15356 bp Ori: QKY35614.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14106-14838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14106-14838 bp Feature: domain Description: GIIM Note: maturase Location: 14913-15111 bp Feature: domain Description: GIIM Note: maturase Location: 14913-15111 bp Feature: gene Location: 16029-16768 bp Feature: domain Description: InsE Location: 16032-16368 bp Feature: domain Description: InsE Location: 16032 -16368 bp Feature: gene Location: 16870-17130 bp Feature: gene Location: 26793-27098 bp Feature: gene Location: 27124-27863 bp Feature: domain Description: InsE Location: 27127-27463 bp Feature: domain Description: InsE Location: 2 712 7-2 7463 bp Feature: gene Location: 28536-28850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28794-28851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8794-2 8851 bp Feature: gene Location: 28851-29024 bp Feature: domain Description: IS5 Location: 28860-29010 bp Feature: domain Description: IS5 Location: 2 8860-2 9010 bp Feature: gene Location: 29174-29807 bp Feature: domain Description: PRK10173 Location: 29177-29615 bp Feature: domain Description: PRK10173 Location: 2 9177-2 9615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), IS5 (COG3039), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)