myRT

myRT report for GCA_013372385.1_ASM1337238v1

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Seq: CP054230.1 Escherichia coli strain EcPF14 chromosome, complete genome (5129852 bp)
Overview 1 RT 1: 45029-47999 bp 2 RT 2: 103281-105569 bp 3 RT 3: 4536704-4540368 bp Neighborhood of RT #1 [45029, 48025] CbtA_toxin CbeA_antitoxin RVT-GII GIIM CbeA_antitoxin DUF987 Neighborhood of RT #2 [103281, 105628] InsE RVT-GII trans_reg_C Neighborhood of RT #3 [4536704, 4540424] trans_reg_C RVT-GII InsE MFS_GlpT Feature: gene Location: 45029-45406 bp Ori: QKY44530.1 Feature: domain Description: CbtA_toxin Location: 45032-45365 bp Feature: domain Description: CbtA_toxin Location: 45032-45365 bp Feature: gene Location: 45496-45579 bp Feature: domain Description: CbeA_antitoxin Location: 45505-45562 bp Feature: domain Description: CbeA_antitoxin Location: 45505-45562 bp Feature: gene Location: 46078-47349 bp Ori: QKY44531.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46315-46972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4631 5-46972 bp Feature: domain Description: GIIM Note: maturase Location: 47053-47275 bp Feature: domain Description: GIIM Note: maturase Location: 47053-47275 bp Feature: gene Location: 47386-47730 bp Ori: QKY44532.1 Feature: domain Description: CbeA_antitoxin Location: 47437-47683 bp Feature: domain Description: CbeA_antitoxin Location: 47437-47683 bp Feature: gene Location: 47804-48025 bp Ori: QKY44533.1 Feature: domain Description: DUF987 Location: 47807-47999 bp Feature: domain Description: DUF987 Location: 47807-47999 bp Feature: gene Location: 103281-103663 bp Feature: gene Location: 103764-104353 bp Feature: domain Description: InsE Location: 103770-104013 bp Feature: domain Description: InsE Location: 1 03770-1 0401 3 bp Feature: gene Location: 104342-104589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104351-104441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 04351 -1 04441 bp Feature: gene Location: 104687-105028 bp Feature: gene Location: 105326-105628 bp Ori: QKY44578.1 Feature: domain Description: trans_reg_C Location: 105374-105569 bp Feature: domain Description: trans_reg_C Location: 1 05374-1 05569 bp Feature: gene Location: 4536704-4537006 bp Ori: QKY48420.1 Feature: domain Description: trans_reg_C Location: 4536752-4536947 bp Feature: domain Description: trans_reg_C Location: 4536752-4536947 bp Feature: gene Location: 4537304-4537645 bp Feature: gene Location: 4537762-4537991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4537771-4537864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4537771 -4537864 bp Feature: gene Location: 4537980-4538565 bp Feature: domain Description: InsE Location: 4537986-4538232 bp Feature: domain Description: InsE Location: 4537986-4538232 bp Feature: gene Location: 4539060-4540424 bp Ori: QKY48422.1 Gene: pgtP Feature: domain Description: MFS_GlpT Location: 4539141-4540368 bp Feature: domain Description: MFS_GlpT Location: 45391 41 -4540368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbtA_toxin (pfam06755), CbeA_antitoxin (pfam06154), RVT-GII, GIIM (pfam08388), DUF987 (pfam06174), InsE (COG2963), trans_reg_C (cd00383), MFS_GlpT (cd17345)