myRT

myRT report for GCA_013372425.1_ASM1337242v1

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Seq: CP054237.1 Escherichia coli strain EcPF5 plasmid p1, complete sequence (131660 bp)
Overview 1 RT 1: 15856-20250 bp Neighborhood of RT #1 [15856, 20306] DDE_Tnp_Tn3 RVT-GII GIIM InsE Rve Feature: gene Location: 15856-16089 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 15871-16027 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 5871 -1 6027 bp Feature: gene Location: 16111-16585 bp Feature: gene Location: 16675-18183 bp Ori: QKY58540.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16933-17665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6933-1 7665 bp Feature: domain Description: GIIM Note: maturase Location: 17740-17938 bp Feature: domain Description: GIIM Note: maturase Location: 1 7740-1 7938 bp Feature: gene Location: 18856-19577 bp Feature: domain Description: InsE Location: 18931-19165 bp Feature: domain Description: InsE Location: 1 8931 -1 91 65 bp Feature: gene Location: 19602-20306 bp Ori: QKY58441.1 Feature: domain Description: Rve Location: 19605-20250 bp Feature: domain Description: Rve Location: 1 9605-20250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388), InsE (COG2963), Rve (COG3316)

Seq: CP054236.1 Escherichia coli strain EcPF5 chromosome, complete genome (5147412 bp)
Overview 1 RT 1: 866716-870724 bp Neighborhood of RT #1 [866716, 870724] InsE PHA02517 RVT-GII GIIM InsE Feature: gene Location: 866716-866910 bp Feature: domain Description: InsE Location: 866731-866902 bp Feature: domain Description: InsE Location: 866731-866902 bp Feature: gene Location: 867018-867491 bp Feature: domain Description: PHA02517 Location: 867024-867489 bp Feature: domain Description: PHA02 517 Location: 86702 4-867489 bp Feature: gene Location: 867581-869089 bp Ori: QKY58235.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 867839-868571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 867839-868571 bp Feature: domain Description: GIIM Note: maturase Location: 868646-868844 bp Feature: domain Description: GIIM Note: maturase Location: 868646-868844 bp Feature: gene Location: 869762-870501 bp Feature: domain Description: InsE Location: 869765-870104 bp Feature: domain Description: InsE Location: 869765-870104 bp Feature: gene Location: 870617-870724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)