myRT

myRT report for GCA_013374255.1_ASM1337425v1

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Seq: AP023224.1 Escherichia coli YJ1 DNA, complete genome (4847574 bp)
Overview 1 RT 1: 94393-98276 bp 2 RT 2: 4163978-4168014 bp Neighborhood of RT #1 [94393, 98281] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [4163978, 4168014] InsG RVT-GII GIIM PHA02517 Feature: gene Location: 94393-95109 bp Feature: domain Description: rph Location: 94396-95104 bp Feature: domain Description: rph Location: 94396-951 04 bp Feature: gene Location: 95161-95817 bp Feature: domain Description: pyrE Location: 95179-95812 bp Feature: domain Description: pyrE Location: 951 79-9581 2 bp Feature: gene Location: 96115-97074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96250-96799 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96250-96799 bp Feature: gene Location: 97120-97716 bp Feature: domain Description: slmA Location: 97126-97702 bp Feature: domain Description: slmA Location: 971 26-97702 bp Feature: gene Location: 97823-98281 bp Feature: domain Description: dut Location: 97829-98276 bp Feature: domain Description: dut Location: 97829-98276 bp Feature: gene Location: 4163978-4165090 bp Feature: domain Description: InsG Location: 4163981-4165019 bp Feature: domain Description: InsG Location: 41 63981 -41 6501 9 bp Feature: gene Location: 4165113-4165253 bp Feature: gene Location: 4165299-4166645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4165395-4166127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 65395-41 661 27 bp Feature: domain Description: GIIM Note: maturase Location: 4166202-4166400 bp Feature: domain Description: GIIM Note: maturase Location: 41 66202-41 66400 bp Feature: gene Location: 4166822-4167208 bp Feature: domain Description: PHA02517 Location: 4166825-4167206 bp Feature: domain Description: PHA0251 7 Location: 41 66825-41 67206 bp Feature: gene Location: 4167391-4168014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), InsG (COG3385), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)