myRT

myRT report for GCA_013375035.1_ASM1337503v1

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Seq: CP056032.1 Spirosoma sp. KUDC1026 chromosome, complete genome (5794290 bp)
Overview 1 RT 1: 3482228-3487299 bp 2 RT 2: 3871544-3876547 bp Neighborhood of RT #1 [3482228, 3487310] HTH_Tnp_1 PHA02517 RVT_N RVT-GII GIIM McrA NuiA DUF937 DUF937 Neighborhood of RT #2 [3871544, 3876603] COG4584 COG4584 IstB_IS21 RVT_N RVT-GII GIIM HTH_Tnp_1 PHA02517 Feature: gene Location: 3482228-3482518 bp Ori: QKZ13788.1 Feature: domain Description: HTH_Tnp_1 Location: 3482240-3482387 bp Feature: domain Description: HTH_Tnp_1 Location: 3482240-3482387 bp Feature: gene Location: 3482533-3483369 bp Ori: QKZ13789.1 Feature: domain Description: PHA02517 Location: 3482671-3483328 bp Feature: domain Description: PHA0251 7 Location: 3482671 -3483328 bp Feature: gene Location: 3483640-3485367 bp Ori: QKZ13790.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3483679-3483925 bp Feature: domain Description: RVT_N Location: 3483679-3483925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3483967-3484648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3483967-3484648 bp Feature: domain Description: GIIM Note: maturase Location: 3484747-3484981 bp Feature: domain Description: GIIM Note: maturase Location: 3484747-3484981 bp Feature: domain Description: McrA Location: 3485068-3485356 bp Feature: domain Description: McrA Location: 3485068-3485356 bp Feature: gene Location: 3486200-3486640 bp Ori: QKZ13791.1 Feature: domain Description: NuiA Location: 3486251-3486638 bp Feature: domain Description: NuiA Location: 3486251 -3486638 bp Feature: gene Location: 3486753-3487310 bp Ori: QKZ13792.1 Feature: domain Description: DUF937 Location: 3486768-3486939 bp Feature: domain Description: DUF937 Location: 3486768-3486939 bp Feature: domain Description: DUF937 Location: 3486957-3487299 bp Feature: domain Description: DUF937 Location: 3486957-3487299 bp Feature: gene Location: 3871544-3873091 bp Ori: QKZ14085.1 Feature: domain Description: COG4584 Location: 3871574-3872441 bp Feature: domain Description: COG4584 Location: 3871 574-3872441 bp Feature: domain Description: COG4584 Location: 3872594-3872990 bp Feature: domain Description: COG4584 Location: 3872594-3872990 bp Feature: gene Location: 3873140-3873892 bp Ori: QKZ14086.1 Feature: domain Description: IstB_IS21 Location: 3873302-3873830 bp Feature: domain Description: IstB_IS21 Location: 3873302-3873830 bp Feature: gene Location: 3873936-3875267 bp Ori: QKZ14087.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3873975-3874221 bp Feature: domain Description: RVT_N Location: 3873975-3874221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3874263-3874944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3874263-3874944 bp Feature: domain Description: GIIM Note: maturase Location: 3875043-3875244 bp Feature: domain Description: GIIM Note: maturase Location: 3875043-3875244 bp Feature: gene Location: 3875399-3875710 bp Ori: QKZ14088.1 Feature: domain Description: HTH_Tnp_1 Location: 3875414-3875639 bp Feature: domain Description: HTH_Tnp_1 Location: 387541 4-3875639 bp Feature: gene Location: 3875716-3876603 bp Ori: QKZ14089.1 Feature: domain Description: PHA02517 Location: 3875866-3876547 bp Feature: domain Description: PHA0251 7 Location: 3875866-3876547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), NuiA (pfam07924), DUF937 (pfam06078), COG4584 (Transposase ), IstB_IS21 (pfam01695)