myRT

myRT report for GCA_013375715.1_ASM1337571v1

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Seq: CP056083.1 Ralstonia solanacearum strain FJAT91-F1 chromosome, complete genome (3873221 bp)
Overview 1 RT 1: 2515396-2520285 bp Neighborhood of RT #1 [2515396, 2520285] arc_metj PRK13876 RVT-GII PRK13876 Feature: gene Location: 2515396-2515860 bp Ori: QKZ28286.1 Feature: domain Description: arc_metj Location: 2515411-2515519 bp Feature: domain Description: arc_metj Location: 251 541 1 -251 551 9 bp Feature: gene Location: 2515857-2516786 bp Feature: domain Description: PRK13876 Location: 2515860-2516784 bp Feature: domain Description: PRK1 3876 Location: 251 5860-251 6784 bp Feature: gene Location: 2516806-2518338 bp Ori: QKZ28287.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2517217-2517907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 721 7-251 7907 bp Feature: gene Location: 2518704-2519780 bp Gene: traG Feature: domain Description: PRK13876 Location: 2518707-2519781 bp Feature: domain Description: PRK1 3876 Location: 251 8707-251 9781 bp Feature: gene Location: 2520004-2520285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arc_metj (LOAD_arc_metj), PRK13876 (conjugal transfer coupling protein TraG; Provisional), RVT-GII

Seq: CP056084.1 Ralstonia solanacearum strain FJAT91-F1 plasmid plas1, complete sequence (2000885 bp)
Overview 1 RT 1: 450542-460579 bp 2 RT 2: 667124-714721 bp 3 RT 3: 900029-906090 bp Neighborhood of RT #1 [450542, 460848] DUF4011 DEXXQc_SF1 DEXXQc_SF1 KOG1803 RVT-GII MTES_1575 DUF3320 Nterm_IS4 DDE_Tnp_1 Neighborhood of RT #2 [667124, 714721] PRK12467 PP-binding PKS PKS_AT PRK12467 HemL seco_metab_LLM PRK12467 PRK12467 PP-binding Condensation A_NRPS_alphaAR PRK12467 COG4908 EntF PRK12467 PRK12467 PRK12467 PRK12467 PRK12316 PRK12467 PRK12467 PP-binding PRK12316 Thioesterase entF RVT-GII Neighborhood of RT #3 [900029, 906596] AcrR MFS_MucK RVT-GII COG4544 PolY_like Feature: gene Location: 450542-450763 bp Feature: gene Location: 451600-456186 bp Feature: domain Description: DUF4011 Location: 451708-452293 bp Feature: domain Description: DUF4011 Location: 451708-452 2 93 bp Feature: domain Description: DEXXQc_SF1 Location: 452632-453208 bp Feature: domain Description: DEXXQc_SF1 Location: 452 632 -4532 08 bp Feature: domain Description: DEXXQc_SF1 Location: 454816-455578 bp Feature: domain Description: DEXXQc_SF1 Location: 454816-455578 bp Feature: domain Description: KOG1803 Location: 455929-456097 bp Feature: domain Description: KOG1803 Location: 45592 9-456097 bp Feature: gene Location: 456554-458086 bp Ori: QKZ29974.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456965-457655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456965-457655 bp Feature: gene Location: 458107-459147 bp Feature: domain Description: MTES_1575 Location: 458167-458458 bp Feature: domain Description: MTES_1575 Location: 458167-458458 bp Feature: domain Description: DUF3320 Location: 458632-458773 bp Feature: domain Description: DUF332 0 Location: 458632 -458773 bp Feature: gene Location: 459520-460848 bp Ori: QKZ29975.1 Feature: domain Description: Nterm_IS4 Location: 459568-459844 bp Feature: domain Description: Nterm_IS4 Location: 459568-459844 bp Feature: domain Description: DDE_Tnp_1 Location: 459907-460579 bp Feature: domain Description: DDE_Tnp_1 Location: 459907-460579 bp Feature: gene Location: 667124-694165 bp Ori: QKZ30127.1 Feature: domain Description: PRK12467 Location: 667160-668654 bp Feature: domain Description: PRK12 467 Location: 667160-668654 bp Feature: domain Description: PP-binding Location: 668972-669167 bp Feature: domain Description: PP-binding Location: 668972 -669167 bp Feature: domain Description: PKS Location: 669251-670502 bp Feature: domain Description: PKS Location: 6692 51-670502 bp Feature: domain Description: PKS_AT Location: 670814-671666 bp Feature: domain Description: PKS_AT Location: 670814-671666 bp Feature: domain Description: PRK12467 Location: 671975-672206 bp Feature: domain Description: PRK12 467 Location: 671975-672 2 06 bp Feature: domain Description: HemL Location: 672710-673967 bp Feature: domain Description: HemL Location: 672 710-673967 bp Feature: domain Description: seco_metab_LLM Location: 674162-675179 bp Feature: domain Description: seco_metab_LLM Location: 674162 -675179 bp Feature: domain Description: PRK12467 Location: 675215-676280 bp Feature: domain Description: PRK12 467 Location: 6752 15-6762 80 bp Feature: domain Description: PRK12467 Location: 676355-678092 bp Feature: domain Description: PRK12 467 Location: 676355-678092 bp Feature: domain Description: PP-binding Location: 678149-678338 bp Feature: domain Description: PP-binding Location: 678149-678338 bp Feature: domain Description: Condensation Location: 678392-679721 bp Feature: domain Description: Condensation Location: 678392 -67972 1 bp Feature: domain Description: A_NRPS_alphaAR Location: 679823-680069 bp Feature: domain Description: A_NRPS_alphaAR Location: 67982 3-680069 bp Feature: domain Description: PRK12467 Location: 680114-684530 bp Feature: domain Description: PRK12 467 Location: 680114-684530 bp Feature: domain Description: COG4908 Location: 684803-685169 bp Feature: domain Description: COG4908 Location: 684803-685169 bp Feature: domain Description: EntF Location: 685394-687332 bp Feature: domain Description: EntF Location: 685394-687332 bp Feature: domain Description: PRK12467 Location: 687434-689573 bp Feature: domain Description: PRK12 467 Location: 687434-689573 bp Feature: domain Description: PRK12467 Location: 689594-694136 bp Feature: domain Description: PRK12 467 Location: 689594-694136 bp Feature: gene Location: 694165-712026 bp Ori: QKZ30128.1 Feature: domain Description: PRK12467 Location: 694381-695656 bp Feature: domain Description: PRK12 467 Location: 694381-695656 bp Feature: domain Description: PRK12467 Location: 695686-697468 bp Feature: domain Description: PRK12 467 Location: 695686-697468 bp Feature: domain Description: PRK12316 Location: 697612-700768 bp Feature: domain Description: PRK12 316 Location: 697612 -700768 bp Feature: domain Description: PRK12467 Location: 700801-702388 bp Feature: domain Description: PRK12 467 Location: 700801-702 388 bp Feature: domain Description: PRK12467 Location: 702613-706873 bp Feature: domain Description: PRK12 467 Location: 702 613-706873 bp Feature: domain Description: PP-binding Location: 706927-707116 bp Feature: domain Description: PP-binding Location: 70692 7-707116 bp Feature: domain Description: PRK12316 Location: 707140-710308 bp Feature: domain Description: PRK12 316 Location: 707140-710308 bp Feature: domain Description: Thioesterase Location: 710338-710647 bp Feature: domain Description: Thioesterase Location: 710338-710647 bp Feature: domain Description: entF Location: 711148-711553 bp Feature: domain Description: entF Location: 711148-711553 bp Feature: gene Location: 712547-714079 bp Ori: QKZ30129.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712958-713648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712 958-713648 bp Feature: gene Location: 714217-714528 bp Feature: gene Location: 714563-714721 bp Feature: gene Location: 900029-900604 bp Ori: QKZ30272.1 Feature: domain Description: AcrR Location: 900041-900545 bp Feature: domain Description: AcrR Location: 900041-900545 bp Feature: gene Location: 900821-902077 bp Ori: QKZ30273.1 Feature: domain Description: MFS_MucK Location: 900914-902054 bp Feature: domain Description: MFS_MucK Location: 900914-902 054 bp Feature: gene Location: 902580-904112 bp Ori: QKZ30274.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902991-903681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902 991-903681 bp Feature: gene Location: 904157-905092 bp Ori: QKZ30275.1 Gene: imuA Feature: domain Description: COG4544 Location: 904286-904766 bp Feature: domain Description: COG4544 Location: 9042 86-904766 bp Feature: gene Location: 905025-906596 bp Ori: QKZ30276.1 Feature: domain Description: PolY_like Location: 905040-906090 bp Feature: domain Description: PolY_like Location: 905040-906090 bp Sorry, your browser does not support 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Associated domains:myRT DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), KOG1803 (KOG1803, DNA helicase ), RVT-GII, MTES_1575 (pfam18741), DUF3320 (pfam11784), Nterm_IS4 (pfam13006), DDE_Tnp_1 (pfam01609), PRK12467 (peptide synthase; Provisional), PP-binding (pfam00550)
PKS (cd00833), PKS_AT (smart00827), HemL (COG0001), seco_metab_LLM (TIGR04020), Condensation (pfam00668), A_NRPS_alphaAR (cd17647), COG4908 (Uncharacterized protein, contains a NRPS condensation (elongation) domain ), EntF (COG3319), PRK12316 (peptide synthase; Provisional), Thioesterase (pfam00975)
entF (PRK10252), AcrR (COG1309), MFS_MucK (cd17371), COG4544 (Uncharacterized conserved protein ), PolY_like (cd03468)