myRT

myRT report for GCA_013376555.1_ASM1337655v1

Download annotations/find similar RTs

Seq: CP051160.1 Klebsiella pneumoniae strain KP20191015 chromosome, complete genome (5409809 bp)
Overview 1 RT 1: 341876-345397 bp 2 RT 2: 3016454-3020105 bp 3 RT 3: 3219331-3224695 bp 4 RT 4: 3321562-3325397 bp 5 RT 5: 3565170-3570724 bp Neighborhood of RT #1 [341876, 345420] PRK10276 RVT-GII StbA Neighborhood of RT #2 [3016454, 3020161] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #3 [3219331, 3224748] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [3321562, 3325399] PRK05451 RVT-GII PRK10597 bssS Neighborhood of RT #5 [3565170, 3570744] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Feature: gene Location: 341876-342307 bp Ori: QLA31531.1 Gene: umuD Feature: domain Description: PRK10276 Location: 341924-342290 bp Feature: domain Description: PRK1 0276 Location: 341 924-342290 bp Feature: gene Location: 342285-342400 bp Feature: gene Location: 342713-344200 bp Ori: QLA31532.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343118-343808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3431 1 8-343808 bp Feature: gene Location: 344193-344318 bp Feature: gene Location: 344449-345420 bp Ori: QLA31533.1 Feature: domain Description: StbA Location: 344452-345397 bp Feature: domain Description: StbA Location: 344452-345397 bp Feature: gene Location: 3016454-3016702 bp Ori: QLA34027.1 Feature: domain Description: PRK10597 Location: 3016457-3016697 bp Feature: domain Description: PRK1 0597 Location: 301 6457-301 6697 bp Feature: gene Location: 3016925-3017209 bp Feature: gene Location: 3017287-3018774 bp Ori: QLA34029.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3017692-3018382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 7692-301 8382 bp Feature: gene Location: 3019224-3019433 bp Feature: gene Location: 3019430-3020161 bp Ori: QLA34031.1 Feature: domain Description: Laminin_G_3 Location: 3019766-3020105 bp Feature: domain Description: Laminin_G_3 Location: 301 9766-30201 05 bp Feature: gene Location: 3219331-3220596 bp Ori: QLA34230.1 Feature: domain Description: umuC Location: 3219334-3220594 bp Feature: domain Description: umuC Location: 321 9334-3220594 bp Feature: gene Location: 3220599-3221018 bp Ori: QLA34231.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3220602-3221013 bp Feature: domain Description: PRK1 0276 Location: 3220602-3221 01 3 bp Feature: gene Location: 3221097-3222584 bp Ori: QLA34232.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3221502-3222192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3221 502-32221 92 bp Feature: gene Location: 3223199-3223441 bp Ori: QLA34233.1 Feature: domain Description: DinI Location: 3223250-3223430 bp Feature: domain Description: DinI Location: 3223250-3223430 bp Feature: gene Location: 3223612-3224748 bp Ori: QLA36375.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3223792-3224695 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3223792-3224695 bp Feature: gene Location: 3321562-3322608 bp Ori: QLA34328.1 Gene: pyrC Feature: domain Description: PRK05451 Location: 3321577-3322603 bp Feature: domain Description: PRK05451 Location: 3321 577-3322603 bp Feature: gene Location: 3322625-3322708 bp Feature: gene Location: 3322701-3324188 bp Ori: QLA34329.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3323106-3323796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33231 06-3323796 bp Feature: gene Location: 3324591-3324842 bp Ori: QLA34330.1 Gene: dinI Feature: domain Description: PRK10597 Location: 3324594-3324831 bp Feature: domain Description: PRK1 0597 Location: 3324594-3324831 bp Feature: gene Location: 3325145-3325399 bp Ori: QLA36385.1 Gene: bssS Feature: domain Description: bssS Location: 3325148-3325397 bp Feature: domain Description: bssS Location: 33251 48-3325397 bp Feature: gene Location: 3565170-3566048 bp Ori: QLA36394.1 Feature: domain Description: Phage_CI_repr Location: 3565197-3565380 bp Feature: domain Description: Phage_CI_repr Location: 35651 97-3565380 bp Feature: domain Description: Phage_CI_repr Location: 3565509-3565701 bp Feature: domain Description: Phage_CI_repr Location: 3565509-3565701 bp Feature: domain Description: Phage_CI_C Location: 3565728-3566022 bp Feature: domain Description: Phage_CI_C Location: 3565728-3566022 bp Feature: gene Location: 3566060-3567004 bp Feature: gene Location: 3567103-3568590 bp Ori: QLA34550.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3567508-3568198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3567508-35681 98 bp Feature: gene Location: 3569078-3570058 bp Ori: QLA36395.1 Feature: domain Description: int Location: 3569081-3570008 bp Feature: domain Description: int Location: 3569081 -3570008 bp Feature: gene Location: 3570181-3570744 bp Ori: QLA34551.1 Feature: domain Description: YbjK Location: 3570187-3570724 bp Feature: domain Description: YbjK Location: 35701 87-3570724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), PRK10597 (DNA damage-inducible protein I; Provisional), Laminin_G_3 (pfam13385), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), PRK05451 (dihydroorotase; Provisional), bssS (PRK12301)
Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226)