myRT

myRT report for GCA_013376955.1_ASM1337695v1

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Seq: CP039439.1 Salmonella enterica subsp. enterica serovar Kentucky strain VNSEC013 chromosome, complete genome (4831443 bp)
Overview 1 RT 1: 690961-697131 bp 2 RT 2: 1168646-1171708 bp Neighborhood of RT #1 [690961, 697133] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [1168646, 1171708] TIR-like RVT-Retrons InsE Feature: gene Location: 690961-692661 bp Ori: QLA97562.1 Feature: domain Description: 5 Location: 692185-692479 bp Feature: domain Description: 5 Location: 6921 85-692479 bp Feature: gene Location: 693413-693598 bp Feature: gene Location: 693568-694332 bp Ori: QLA93851.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 693691-694144 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 693691 -6941 44 bp Feature: gene Location: 694656-695162 bp Ori: QLA93852.1 Feature: domain Description: PRK10201 Location: 694659-695157 bp Feature: domain Description: PRK1 0201 Location: 694659-6951 57 bp Feature: gene Location: 695286-697133 bp Ori: QLA93853.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 695292-697131 bp Feature: domain Description: PRK05658 Location: 695292-6971 31 bp Feature: gene Location: 1168646-1168855 bp Feature: gene Location: 1168921-1169760 bp Ori: QLA94288.1 Feature: domain Description: TIR-like Location: 1169326-1169680 bp Feature: domain Description: TIR-like Location: 1 1 69326-1 1 69680 bp Feature: gene Location: 1169810-1170769 bp Ori: QLA94289.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1169990-1170512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 69990-1 1 7051 2 bp Feature: gene Location: 1170800-1171027 bp Feature: gene Location: 1171459-1171708 bp Ori: QLA94291.1 Feature: domain Description: InsE Location: 1171468-1171708 bp Feature: domain Description: InsE Location: 1 1 71 468-1 1 71 708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), TIR-like (pfam10137), RVT-Retrons, InsE (COG2963)