myRT

myRT report for GCA_013378215.1_ASM1337821v1

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Seq: CP039946.1 Klebsiella pneumoniae strain 19KM28 plasmid pMBR_DHA-1_1C_19KM28, complete sequence (54251 bp)
Overview 1 RT 1: 5260-8713 bp Neighborhood of RT #1 [5260, 8751] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 5260-5691 bp Ori: QLB89420.1 Gene: umuD Feature: domain Description: PRK10276 Location: 5311-5674 bp Feature: domain Description: PRK1 0276 Location: 531 1 -5674 bp Feature: gene Location: 5849-6100 bp Feature: gene Location: 6100-7584 bp Ori: QLB89422.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502-7192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502-71 92 bp Feature: gene Location: 7736-8433 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7742-7844 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7742-7844 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7865-7997 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7865-7997 bp Feature: gene Location: 8443-8751 bp Feature: domain Description: Rep_3 Location: 8449-8713 bp Feature: domain Description: Rep_3 Location: 8449-871 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)

Seq: CP039945.1 Klebsiella pneumoniae strain 19KM28 chromosome, complete genome (5453228 bp)
Overview 1 RT 1: 1620368-1624765 bp 2 RT 2: 3058727-3061235 bp 3 RT 3: 3138409-3142547 bp 4 RT 4: 3324261-3328360 bp 5 RT 5: 3660967-3664405 bp 6 RT 6: 3748705-3754028 bp Neighborhood of RT #1 [1620368, 1624815] PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #2 [3058727, 3061235] RVT-GII Neighborhood of RT #3 [3138409, 3142547] umuC PRK10276 RVT-GII Neighborhood of RT #4 [3324261, 3328371] umuC PRK10276 RVT-GII DinI Neighborhood of RT #5 [3660967, 3664455] DinI RVT-GII int Neighborhood of RT #6 [3748705, 3754069] UvrB RVT-GII LivF Feature: gene Location: 1620368-1620553 bp Ori: QLB85743.1 Feature: domain Description: PRK15440 Location: 1620371-1620518 bp Feature: domain Description: PRK15440 Location: 162 0371-162 0518 bp Feature: gene Location: 1620635-1620886 bp Feature: gene Location: 1620886-1622370 bp Ori: QLB85745.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621288-1621978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 12 88-162 1978 bp Feature: gene Location: 1622428-1623483 bp Gene: rhmD Feature: domain Description: PRK15440 Location: 1622434-1623481 bp Feature: domain Description: PRK15440 Location: 162 2 434-162 3481 bp Feature: gene Location: 1623526-1624815 bp Ori: QLB89236.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1623568-1624765 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 162 3568-162 4765 bp Feature: gene Location: 3058727-3059011 bp Feature: gene Location: 3059025-3059096 bp Feature: gene Location: 3059089-3060573 bp Ori: QLB87011.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059491-3060181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059491-3060181 bp Feature: gene Location: 3060573-3060824 bp Feature: gene Location: 3061026-3061235 bp Feature: gene Location: 3138409-3139674 bp Ori: QLB87101.1 Gene: umuC Feature: domain Description: umuC Location: 3138412-3139672 bp Feature: domain Description: umuC Location: 3138412 -3139672 bp Feature: gene Location: 3139676-3140095 bp Ori: QLB87102.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3139679-3140090 bp Feature: domain Description: PRK102 76 Location: 3139679-3140090 bp Feature: gene Location: 3140175-3141659 bp Ori: QLB87103.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140577-3141267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140577-31412 67 bp Feature: gene Location: 3141659-3141910 bp Feature: gene Location: 3142458-3142547 bp Feature: gene Location: 3324261-3325526 bp Ori: QLB87289.1 Gene: umuC Feature: domain Description: umuC Location: 3324264-3325524 bp Feature: domain Description: umuC Location: 332 42 64-332 552 4 bp Feature: gene Location: 3325529-3325948 bp Ori: QLB87290.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3325532-3325943 bp Feature: domain Description: PRK102 76 Location: 332 5532 -332 5943 bp Feature: gene Location: 3326027-3327511 bp Ori: QLB87291.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3326429-3327119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 642 9-332 7119 bp Feature: gene Location: 3327511-3327762 bp Feature: gene Location: 3328129-3328371 bp Ori: QLB87293.1 Feature: domain Description: DinI Location: 3328180-3328360 bp Feature: domain Description: DinI Location: 332 8180-332 8360 bp Feature: gene Location: 3660967-3661272 bp Ori: QLB87597.1 Feature: domain Description: DinI Location: 3661081-3661267 bp Feature: domain Description: DinI Location: 3661081-36612 67 bp Feature: gene Location: 3661211-3661399 bp Feature: gene Location: 3661500-3662984 bp Ori: QLB87598.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3661902-3662592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3661902 -3662 592 bp Feature: gene Location: 3662984-3663235 bp Feature: gene Location: 3663403-3664455 bp Ori: QLB87600.1 Feature: domain Description: int Location: 3663406-3664405 bp Feature: domain Description: int Location: 3663406-3664405 bp Feature: gene Location: 3748705-3750726 bp Ori: QLB87677.1 Gene: uvrB Feature: domain Description: UvrB Location: 3748711-3750712 bp Feature: domain Description: UvrB Location: 3748711-3750712 bp Feature: gene Location: 3750937-3751188 bp Feature: gene Location: 3751188-3752672 bp Ori: QLB87679.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3751590-3752280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3751590-3752 2 80 bp Feature: gene Location: 3753048-3753260 bp Feature: gene Location: 3753347-3754069 bp Ori: QLB87681.1 Feature: domain Description: LivF Location: 3753350-3754028 bp Feature: domain Description: LivF Location: 3753350-375402 8 bp Sorry, your 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Associated domains:myRT PRK15440 (L-rhamnonate dehydratase; Provisional), RVT-GII, MFS_ExuT_GudP_like (cd17319), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), int (PHA02601), UvrB (pfam12344), LivF (COG0410)