myRT

myRT report for GCA_013378235.1_ASM1337823v1

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Seq: CP039949.1 Klebsiella pneumoniae strain 19KM57 plasmid pMBR_DHA-1_2C_19KM57, complete sequence (56374 bp)
Overview 1 RT 1: 5260-8713 bp Neighborhood of RT #1 [5260, 8751] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 5260-5691 bp Ori: QLB94759.1 Gene: umuD Feature: domain Description: PRK10276 Location: 5311-5674 bp Feature: domain Description: PRK1 0276 Location: 531 1 -5674 bp Feature: gene Location: 5849-6100 bp Feature: gene Location: 6100-7584 bp Ori: QLB94761.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502-7192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502-71 92 bp Feature: gene Location: 7736-8433 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7742-7844 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7742-7844 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7865-7997 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7865-7997 bp Feature: gene Location: 8443-8751 bp Feature: domain Description: Rep_3 Location: 8449-8713 bp Feature: domain Description: Rep_3 Location: 8449-871 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)

Seq: CP039948.1 Klebsiella pneumoniae strain 19KM57 chromosome, complete genome (5452451 bp)
Overview 1 RT 1: 1620368-1624765 bp 2 RT 2: 3058727-3061235 bp 3 RT 3: 3138409-3142547 bp 4 RT 4: 3323484-3327583 bp 5 RT 5: 3660190-3663628 bp 6 RT 6: 3747928-3753251 bp Neighborhood of RT #1 [1620368, 1624815] PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #2 [3058727, 3061235] RVT-GII Neighborhood of RT #3 [3138409, 3142547] umuC PRK10276 RVT-GII Neighborhood of RT #4 [3323484, 3327594] umuC PRK10276 RVT-GII DinI Neighborhood of RT #5 [3660190, 3663678] DinI RVT-GII int Neighborhood of RT #6 [3747928, 3753292] UvrB RVT-GII LivF Feature: gene Location: 1620368-1620553 bp Ori: QLB91081.1 Feature: domain Description: PRK15440 Location: 1620371-1620518 bp Feature: domain Description: PRK15440 Location: 162 0371-162 0518 bp Feature: gene Location: 1620635-1620886 bp Feature: gene Location: 1620886-1622370 bp Ori: QLB91083.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621288-1621978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 12 88-162 1978 bp Feature: gene Location: 1622428-1623483 bp Gene: rhmD Feature: domain Description: PRK15440 Location: 1622434-1623481 bp Feature: domain Description: PRK15440 Location: 162 2 434-162 3481 bp Feature: gene Location: 1623526-1624815 bp Ori: QLB94573.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1623568-1624765 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 162 3568-162 4765 bp Feature: gene Location: 3058727-3059011 bp Feature: gene Location: 3059025-3059096 bp Feature: gene Location: 3059089-3060573 bp Ori: QLB92347.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059491-3060181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059491-3060181 bp Feature: gene Location: 3060573-3060824 bp Feature: gene Location: 3061026-3061235 bp Feature: gene Location: 3138409-3139674 bp Ori: QLB92437.1 Gene: umuC Feature: domain Description: umuC Location: 3138412-3139672 bp Feature: domain Description: umuC Location: 3138412 -3139672 bp Feature: gene Location: 3139676-3140095 bp Ori: QLB92438.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3139679-3140090 bp Feature: domain Description: PRK102 76 Location: 3139679-3140090 bp Feature: gene Location: 3140175-3141659 bp Ori: QLB92439.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140577-3141267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140577-31412 67 bp Feature: gene Location: 3141659-3141910 bp Feature: gene Location: 3142458-3142547 bp Feature: gene Location: 3323484-3324749 bp Ori: QLB92626.1 Gene: umuC Feature: domain Description: umuC Location: 3323487-3324747 bp Feature: domain Description: umuC Location: 332 3487-332 4747 bp Feature: gene Location: 3324752-3325171 bp Ori: QLB92627.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3324755-3325166 bp Feature: domain Description: PRK102 76 Location: 332 4755-332 5166 bp Feature: gene Location: 3325250-3326734 bp Ori: QLB92628.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3325652-3326342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 5652 -332 6342 bp Feature: gene Location: 3326734-3326985 bp Feature: gene Location: 3327352-3327594 bp Ori: QLB92630.1 Feature: domain Description: DinI Location: 3327403-3327583 bp Feature: domain Description: DinI Location: 332 7403-332 7583 bp Feature: gene Location: 3660190-3660495 bp Ori: QLB92934.1 Feature: domain Description: DinI Location: 3660304-3660490 bp Feature: domain Description: DinI Location: 3660304-3660490 bp Feature: gene Location: 3660434-3660622 bp Feature: gene Location: 3660723-3662207 bp Ori: QLB92935.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3661125-3661815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366112 5-3661815 bp Feature: gene Location: 3662207-3662458 bp Feature: gene Location: 3662626-3663678 bp Ori: QLB92937.1 Feature: domain Description: int Location: 3662629-3663628 bp Feature: domain Description: int Location: 3662 62 9-366362 8 bp Feature: gene Location: 3747928-3749949 bp Ori: QLB93014.1 Gene: uvrB Feature: domain Description: UvrB Location: 3747934-3749935 bp Feature: domain Description: UvrB Location: 3747934-3749935 bp Feature: gene Location: 3750160-3750411 bp Feature: gene Location: 3750411-3751895 bp Ori: QLB93016.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750813-3751503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750813-3751503 bp Feature: gene Location: 3752271-3752483 bp Feature: gene Location: 3752570-3753292 bp Ori: QLB93018.1 Feature: domain Description: LivF Location: 3752573-3753251 bp Feature: domain Description: LivF Location: 3752 573-37532 51 bp Sorry, 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Associated domains:myRT PRK15440 (L-rhamnonate dehydratase; Provisional), RVT-GII, MFS_ExuT_GudP_like (cd17319), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), int (PHA02601), UvrB (pfam12344), LivF (COG0410)