myRT

myRT report for GCA_013378295.1_ASM1337829v1

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Seq: CP039957.1 Klebsiella pneumoniae strain EAN23 chromosome, complete genome (5452022 bp)
Overview 1 RT 1: 1620302-1624699 bp 2 RT 2: 3058661-3061169 bp 3 RT 3: 3138344-3142482 bp 4 RT 4: 3323419-3327518 bp 5 RT 5: 3659761-3663199 bp 6 RT 6: 3747499-3752822 bp Neighborhood of RT #1 [1620302, 1624749] PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #2 [3058661, 3061169] RVT-GII Neighborhood of RT #3 [3138344, 3142482] umuC PRK10276 RVT-GII Neighborhood of RT #4 [3323419, 3327529] umuC PRK10276 RVT-GII DinI Neighborhood of RT #5 [3659761, 3663249] DinI RVT-GII int Neighborhood of RT #6 [3747499, 3752863] UvrB RVT-GII LivF Feature: gene Location: 1620302-1620487 bp Ori: QLC06985.1 Feature: domain Description: PRK15440 Location: 1620305-1620452 bp Feature: domain Description: PRK1 5440 Location: 1 620305-1 620452 bp Feature: gene Location: 1620569-1620820 bp Feature: gene Location: 1620820-1622304 bp Ori: QLC06987.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621222-1621912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 621 222-1 621 91 2 bp Feature: gene Location: 1622362-1623417 bp Gene: rhmD Feature: domain Description: PRK15440 Location: 1622368-1623415 bp Feature: domain Description: PRK1 5440 Location: 1 622368-1 62341 5 bp Feature: gene Location: 1623460-1624749 bp Ori: QLC10475.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1623502-1624699 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 623502-1 624699 bp Feature: gene Location: 3058661-3058945 bp Feature: gene Location: 3058959-3059030 bp Feature: gene Location: 3059023-3060507 bp Ori: QLC08251.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059425-3060115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059425-30601 1 5 bp Feature: gene Location: 3060507-3060758 bp Feature: gene Location: 3060960-3061169 bp Feature: gene Location: 3138344-3139609 bp Ori: QLC08342.1 Gene: umuC Feature: domain Description: umuC Location: 3138347-3139607 bp Feature: domain Description: umuC Location: 31 38347-31 39607 bp Feature: gene Location: 3139611-3140030 bp Ori: QLC08343.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3139614-3140025 bp Feature: domain Description: PRK1 0276 Location: 31 3961 4-31 40025 bp Feature: gene Location: 3140110-3141594 bp Ori: QLC08344.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140512-3141202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 4051 2-31 41 202 bp Feature: gene Location: 3141594-3141845 bp Feature: gene Location: 3142393-3142482 bp Feature: gene Location: 3323419-3324684 bp Ori: QLC08531.1 Gene: umuC Feature: domain Description: umuC Location: 3323422-3324682 bp Feature: domain Description: umuC Location: 3323422-3324682 bp Feature: gene Location: 3324687-3325106 bp Ori: QLC08532.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3324690-3325101 bp Feature: domain Description: PRK1 0276 Location: 3324690-33251 01 bp Feature: gene Location: 3325185-3326669 bp Ori: QLC08533.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3325587-3326277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3325587-3326277 bp Feature: gene Location: 3326669-3326920 bp Feature: gene Location: 3327287-3327529 bp Ori: QLC08535.1 Feature: domain Description: DinI Location: 3327338-3327518 bp Feature: domain Description: DinI Location: 3327338-332751 8 bp Feature: gene Location: 3659761-3660066 bp Ori: QLC08839.1 Feature: domain Description: DinI Location: 3659875-3660061 bp Feature: domain Description: DinI Location: 3659875-3660061 bp Feature: gene Location: 3660005-3660193 bp Feature: gene Location: 3660294-3661778 bp Ori: QLC08840.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3660696-3661386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3660696-3661 386 bp Feature: gene Location: 3661778-3662029 bp Feature: gene Location: 3662197-3663249 bp Ori: QLC08842.1 Feature: domain Description: int Location: 3662200-3663199 bp Feature: domain Description: int Location: 3662200-36631 99 bp Feature: gene Location: 3747499-3749520 bp Ori: QLC08919.1 Gene: uvrB Feature: domain Description: UvrB Location: 3747505-3749506 bp Feature: domain Description: UvrB Location: 3747505-3749506 bp Feature: gene Location: 3749731-3749982 bp Feature: gene Location: 3749982-3751466 bp Ori: QLC08921.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750384-3751074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750384-3751 074 bp Feature: gene Location: 3751842-3752054 bp Feature: gene Location: 3752141-3752863 bp Ori: QLC08923.1 Feature: domain Description: LivF Location: 3752144-3752822 bp Feature: domain Description: LivF Location: 37521 44-3752822 bp Sorry, your 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Associated domains:myRT PRK15440 (L-rhamnonate dehydratase; Provisional), RVT-GII, MFS_ExuT_GudP_like (cd17319), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), int (PHA02601), UvrB (pfam12344), LivF (COG0410)

Seq: CP039958.1 Klebsiella pneumoniae strain EAN23 plasmid pMBR_DHA-1_1C_EAN23, complete sequence (54469 bp)
Overview 1 RT 1: 5260-8713 bp Neighborhood of RT #1 [5260, 8751] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 5260-5691 bp Ori: QLC10664.1 Gene: umuD Feature: domain Description: PRK10276 Location: 5311-5674 bp Feature: domain Description: PRK102 76 Location: 5311-5674 bp Feature: gene Location: 5849-6100 bp Feature: gene Location: 6100-7584 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502-7192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502 -7192 bp Feature: gene Location: 7736-8433 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7742-7844 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7742 -7844 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7865-7997 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7865-7997 bp Feature: gene Location: 8443-8751 bp Feature: domain Description: Rep_3 Location: 8449-8713 bp Feature: domain Description: Rep_3 Location: 8449-8713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)