myRT

myRT report for GCA_013378315.1_ASM1337831v1

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Seq: CP039960.1 Klebsiella pneumoniae strain EAN40 chromosome, complete genome (5452088 bp)
Overview 1 RT 1: 1620368-1624765 bp 2 RT 2: 3058727-3061235 bp 3 RT 3: 3138410-3142548 bp 4 RT 4: 3323485-3327584 bp 5 RT 5: 3659827-3663265 bp 6 RT 6: 3747565-3752888 bp Neighborhood of RT #1 [1620368, 1624815] PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #2 [3058727, 3061235] RVT-GII Neighborhood of RT #3 [3138410, 3142548] umuC PRK10276 RVT-GII Neighborhood of RT #4 [3323485, 3327595] umuC PRK10276 RVT-GII DinI Neighborhood of RT #5 [3659827, 3663315] DinI RVT-GII int Neighborhood of RT #6 [3747565, 3752929] UvrB RVT-GII LivF Feature: gene Location: 1620368-1620553 bp Ori: QLC12324.1 Feature: domain Description: PRK15440 Location: 1620371-1620518 bp Feature: domain Description: PRK1 5440 Location: 1 620371 -1 62051 8 bp Feature: gene Location: 1620635-1620886 bp Feature: gene Location: 1620886-1622370 bp Ori: QLC12326.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621288-1621978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 621 288-1 621 978 bp Feature: gene Location: 1622428-1623483 bp Gene: rhmD Feature: domain Description: PRK15440 Location: 1622434-1623481 bp Feature: domain Description: PRK1 5440 Location: 1 622434-1 623481 bp Feature: gene Location: 1623526-1624815 bp Ori: QLC15820.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1623568-1624765 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 623568-1 624765 bp Feature: gene Location: 3058727-3059011 bp Feature: gene Location: 3059025-3059096 bp Feature: gene Location: 3059089-3060573 bp Ori: QLC13592.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059491-3060181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059491 -30601 81 bp Feature: gene Location: 3060573-3060824 bp Feature: gene Location: 3061026-3061235 bp Feature: gene Location: 3138410-3139675 bp Ori: QLC13683.1 Gene: umuC Feature: domain Description: umuC Location: 3138413-3139673 bp Feature: domain Description: umuC Location: 31 3841 3-31 39673 bp Feature: gene Location: 3139677-3140096 bp Ori: QLC13684.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3139680-3140091 bp Feature: domain Description: PRK1 0276 Location: 31 39680-31 40091 bp Feature: gene Location: 3140176-3141660 bp Ori: QLC13685.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140578-3141268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 40578-31 41 268 bp Feature: gene Location: 3141660-3141911 bp Feature: gene Location: 3142459-3142548 bp Feature: gene Location: 3323485-3324750 bp Ori: QLC13872.1 Gene: umuC Feature: domain Description: umuC Location: 3323488-3324748 bp Feature: domain Description: umuC Location: 3323488-3324748 bp Feature: gene Location: 3324753-3325172 bp Ori: QLC13873.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3324756-3325167 bp Feature: domain Description: PRK1 0276 Location: 3324756-33251 67 bp Feature: gene Location: 3325251-3326735 bp Ori: QLC13874.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3325653-3326343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3325653-3326343 bp Feature: gene Location: 3326735-3326986 bp Feature: gene Location: 3327353-3327595 bp Ori: QLC13876.1 Feature: domain Description: DinI Location: 3327404-3327584 bp Feature: domain Description: DinI Location: 3327404-3327584 bp Feature: gene Location: 3659827-3660132 bp Ori: QLC14180.1 Feature: domain Description: DinI Location: 3659941-3660127 bp Feature: domain Description: DinI Location: 3659941 -36601 27 bp Feature: gene Location: 3660071-3660259 bp Feature: gene Location: 3660360-3661844 bp Ori: QLC14181.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3660762-3661452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3660762-3661 452 bp Feature: gene Location: 3661844-3662095 bp Feature: gene Location: 3662263-3663315 bp Ori: QLC14183.1 Feature: domain Description: int Location: 3662266-3663265 bp Feature: domain Description: int Location: 3662266-3663265 bp Feature: gene Location: 3747565-3749586 bp Ori: QLC14260.1 Gene: uvrB Feature: domain Description: UvrB Location: 3747571-3749572 bp Feature: domain Description: UvrB Location: 3747571 -3749572 bp Feature: gene Location: 3749797-3750048 bp Feature: gene Location: 3750048-3751532 bp Ori: QLC14262.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750450-3751140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750450-3751 1 40 bp Feature: gene Location: 3751908-3752120 bp Feature: gene Location: 3752207-3752929 bp Ori: QLC14264.1 Feature: domain Description: LivF Location: 3752210-3752888 bp Feature: domain Description: LivF Location: 375221 0-3752888 bp Sorry, your 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Associated domains:myRT PRK15440 (L-rhamnonate dehydratase; Provisional), RVT-GII, MFS_ExuT_GudP_like (cd17319), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), int (PHA02601), UvrB (pfam12344), LivF (COG0410)

Seq: CP039961.1 Klebsiella pneumoniae strain EAN40 plasmid pMBR_DHA-1_1C_EAN40, complete sequence (54467 bp)
Overview 1 RT 1: 5260-8714 bp Neighborhood of RT #1 [5260, 8752] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 5260-5691 bp Ori: QLC16004.1 Gene: umuD Feature: domain Description: PRK10276 Location: 5311-5674 bp Feature: domain Description: PRK102 76 Location: 5311-5674 bp Feature: gene Location: 5849-6100 bp Feature: gene Location: 6100-7585 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502-6676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502 -6676 bp Feature: gene Location: 7737-8434 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7743-7845 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7743-7845 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7866-7998 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7866-7998 bp Feature: gene Location: 8444-8752 bp Feature: domain Description: Rep_3 Location: 8450-8714 bp Feature: domain Description: Rep_3 Location: 8450-8714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)