myRT

myRT report for GCA_013389695.1_ASM1338969v1

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Seq: CP058302.1 Escherichia coli strain AH65 chromosome, complete genome (4769240 bp)
Overview 1 RT 1: 1197551-1204062 bp Neighborhood of RT #1 [1197551, 1204187] HTH_36 AAA_21 RVT-Retrons INT_Rci_Hp1_C INT_Rci_Hp1_C Feature: gene Location: 1197551-1198084 bp Ori: QLD14445.1 Feature: domain Description: HTH_36 Location: 1197737-1197893 bp Feature: domain Description: HTH_36 Location: 1 1 97737-1 1 97893 bp Feature: gene Location: 1198544-1200661 bp Ori: QLD14446.1 Feature: domain Description: AAA_21 Location: 1198619-1199528 bp Feature: domain Description: AAA_21 Location: 1 1 9861 9-1 1 99528 bp Feature: gene Location: 1200828-1201931 bp Ori: QLD14447.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1200978-1201530 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 200978-1 201 530 bp Feature: gene Location: 1202140-1202718 bp Feature: gene Location: 1202730-1204187 bp Ori: QLD14449.1 Feature: domain Description: INT_Rci_Hp1_C Location: 1203108-1203306 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 2031 08-1 203306 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1203591-1204062 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 203591 -1 204062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), AAA_21 (pfam13304), RVT-Retrons, INT_Rci_Hp1_C (cd00796)

Seq: CP058305.1 Escherichia coli strain AH65 plasmid pAH65-3 (139513 bp)
Overview 1 RT 1: 82273-88068 bp Neighborhood of RT #1 [82273, 88073] PRK13698 RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 82273-83244 bp Ori: QLD17921.1 Feature: domain Description: PRK13698 Location: 82276-83239 bp Feature: domain Description: PRK13698 Location: 82 2 76-832 39 bp Feature: gene Location: 84340-84546 bp Feature: gene Location: 85224-87125 bp Ori: QLD17923.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85491-86322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85491-8632 2 bp Feature: domain Description: Intron_maturas2 Location: 86436-86694 bp Feature: domain Description: Intron_maturas2 Location: 86436-86694 bp Feature: domain Description: HNHc Note: nucleases Location: 86868-87030 bp Feature: domain Description: HNHc Note: nucleases Location: 86868-87030 bp Feature: gene Location: 87275-87772 bp Ori: QLD17974.1 Gene: ssb Feature: domain Description: PRK13732 Location: 87278-87770 bp Feature: domain Description: PRK13732 Location: 872 78-87770 bp Feature: gene Location: 87840-88073 bp Ori: QLD17924.1 Feature: domain Description: DUF905 Location: 87870-88068 bp Feature: domain Description: DUF905 Location: 87870-88068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)