myRT

myRT report for GCA_013394345.1_ASM1339434v1

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Seq: AP019816.1 Lactobacillus plantarum SN13T plasmid pSN13T-1 DNA, complete genome (72292 bp)
Overview 1 RT 1: 65-4388 bp Neighborhood of RT #1 [65, 4388] INT_C_like_3 RVT-UG2 MobC Feature: gene Location: 65-397 bp Ori: BBM23410.1 Gene: int2 Feature: domain Description: INT_C_like_3 Location: 74-356 bp Feature: domain Description: INT_C_like_3 Location: 74-356 bp Feature: gene Location: 727-2283 bp Ori: BBM23411.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 940-1810 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 940-1 81 0 bp Feature: gene Location: 2748-3101 bp Ori: BBM23412.1 Gene: mobC Feature: domain Description: MobC Location: 2973-3096 bp Feature: domain Description: MobC Location: 2973-3096 bp Feature: gene Location: 3810-4388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_3 (cd01192), RVT-UG2, MobC (pfam05713)

Seq: AP019815.1 Lactobacillus plantarum SN13T DNA, complete genome (3612790 bp)
Overview 1 RT 1: 609147-612744 bp Neighborhood of RT #1 [609147, 612836] DUF2922 RVT-UG2 CxxCG_CxxCG_HTH Feature: gene Location: 609147-609413 bp Ori: BBM20555.1 Feature: domain Description: DUF2922 Location: 609279-609393 bp Feature: domain Description: DUF2 92 2 Location: 6092 79-609393 bp Feature: gene Location: 609800-610105 bp Feature: gene Location: 610360-611853 bp Ori: BBM20557.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 610594-611398 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 610594-611398 bp Feature: gene Location: 612021-612200 bp Feature: gene Location: 612387-612836 bp Ori: BBM20559.1 Feature: domain Description: CxxCG_CxxCG_HTH Location: 612405-612744 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 612 405-612 744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2922 (pfam11148), RVT-UG2, CxxCG_CxxCG_HTH (TIGR03830)