myRT

myRT report for GCA_013402855.1_ASM1340285v1

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Seq: CP058571.1 Escherichia coli strain EC2 chromosome, complete genome (5146040 bp)
Overview 1 RT 1: 1950937-1956254 bp 2 RT 2: 1991259-1995483 bp Neighborhood of RT #1 [1950937, 1956254] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C Neighborhood of RT #2 [1991259, 1995758] Nuc_deoxyrib_tr RVT-Retrons YbjD Feature: gene Location: 1950937-1951284 bp Ori: QLG57088.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 1950964-1951255 bp Feature: domain Description: TnpB_IS66 Location: 1 950964-1 951 255 bp Feature: gene Location: 1951334-1952689 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1951451-1951664 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 951 451 -1 951 664 bp Feature: domain Description: zf-IS66 Location: 1951685-1951817 bp Feature: domain Description: zf-IS66 Location: 1 951 685-1 951 81 7 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1951862-1952690 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 951 862-1 952690 bp Feature: gene Location: 1953202-1954434 bp Ori: QLG57089.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1953403-1954057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 953403-1 954057 bp Feature: domain Description: GIIM Note: maturase Location: 1954135-1954357 bp Feature: domain Description: GIIM Note: maturase Location: 1 9541 35-1 954357 bp Feature: gene Location: 1954517-1954693 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1954562-1954673 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 954562-1 954673 bp Feature: gene Location: 1955652-1956254 bp Feature: gene Location: 1991259-1992128 bp Ori: QLG57110.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 1991781-1991952 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 991 781 -1 991 952 bp Feature: gene Location: 1992148-1992303 bp Feature: gene Location: 1992784-1993884 bp Ori: QLG57111.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1992967-1993495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 992967-1 993495 bp Feature: gene Location: 1993999-1994724 bp Feature: gene Location: 1994751-1995758 bp Ori: QLG57113.1 Feature: domain Description: YbjD Location: 1995012-1995483 bp Feature: domain Description: YbjD Location: 1 99501 2-1 995483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, YbjD (COG3593)