myRT

myRT report for GCA_013416105.1_ASM1341610v1

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Seq: CP049950.1 Klebsiella pneumoniae strain 19KM1053 chromosome, complete genome (5452593 bp)
Overview 1 RT 1: 1619572-1624765 bp 2 RT 2: 3059105-3062756 bp 3 RT 3: 3139258-3144359 bp 4 RT 4: 3324333-3329697 bp 5 RT 5: 3660857-3665011 bp 6 RT 6: 3747249-3753918 bp Neighborhood of RT #1 [1619572, 1624815] IclR PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #2 [3059105, 3062812] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #3 [3139258, 3144367] umuC PRK10276 RVT-GII XerC PinE Neighborhood of RT #4 [3324333, 3329750] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #5 [3660857, 3665031] DinI RVT-GII int YbjK Neighborhood of RT #6 [3747249, 3753959] PRK10755 UvrB RVT-GII LivF Feature: gene Location: 1619572-1620357 bp Ori: QLI24214.1 Feature: domain Description: IclR Location: 1619599-1620325 bp Feature: domain Description: IclR Location: 1 61 9599-1 620325 bp Feature: gene Location: 1620368-1620553 bp Ori: QLI24215.1 Feature: domain Description: PRK15440 Location: 1620371-1620518 bp Feature: domain Description: PRK1 5440 Location: 1 620371 -1 62051 8 bp Feature: gene Location: 1620883-1622370 bp Ori: QLI24216.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621288-1621978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 621 288-1 621 978 bp Feature: gene Location: 1622428-1623483 bp Gene: rhmD Feature: domain Description: PRK15440 Location: 1622434-1623481 bp Feature: domain Description: PRK1 5440 Location: 1 622434-1 623481 bp Feature: gene Location: 1623526-1624815 bp Ori: QLI27747.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1623568-1624765 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 623568-1 624765 bp Feature: gene Location: 3059105-3059353 bp Ori: QLI25494.1 Feature: domain Description: PRK10597 Location: 3059108-3059348 bp Feature: domain Description: PRK1 0597 Location: 30591 08-3059348 bp Feature: gene Location: 3059576-3059860 bp Feature: gene Location: 3059938-3061425 bp Ori: QLI25496.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3060343-3061033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3060343-3061 033 bp Feature: gene Location: 3061875-3062084 bp Feature: gene Location: 3062081-3062812 bp Ori: QLI25498.1 Feature: domain Description: Laminin_G_3 Location: 3062417-3062756 bp Feature: domain Description: Laminin_G_3 Location: 306241 7-3062756 bp Feature: gene Location: 3139258-3140523 bp Ori: QLI25580.1 Feature: domain Description: umuC Location: 3139261-3140521 bp Feature: domain Description: umuC Location: 31 39261 -31 40521 bp Feature: gene Location: 3140525-3140944 bp Ori: QLI27847.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3140528-3140939 bp Feature: domain Description: PRK1 0276 Location: 31 40528-31 40939 bp Feature: gene Location: 3141024-3142511 bp Ori: QLI25581.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141429-3142119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 41 429-31 421 1 9 bp Feature: gene Location: 3143406-3143828 bp Ori: QLI25582.1 Feature: domain Description: XerC Location: 3143442-3143787 bp Feature: domain Description: XerC Location: 31 43442-31 43787 bp Feature: gene Location: 3143906-3144367 bp Feature: domain Description: PinE Location: 3143909-3144359 bp Feature: domain Description: PinE Location: 31 43909-31 44359 bp Feature: gene Location: 3324333-3325598 bp Ori: QLI25765.1 Feature: domain Description: umuC Location: 3324336-3325596 bp Feature: domain Description: umuC Location: 3324336-3325596 bp Feature: gene Location: 3325601-3326020 bp Ori: QLI25766.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3325604-3326015 bp Feature: domain Description: PRK1 0276 Location: 3325604-332601 5 bp Feature: gene Location: 3326099-3327586 bp Ori: QLI25767.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3326504-3327194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3326504-33271 94 bp Feature: gene Location: 3328201-3328443 bp Ori: QLI25768.1 Feature: domain Description: DinI Location: 3328252-3328432 bp Feature: domain Description: DinI Location: 3328252-3328432 bp Feature: gene Location: 3328614-3329750 bp Ori: QLI27857.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3328794-3329697 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3328794-3329697 bp Feature: gene Location: 3660857-3661090 bp Ori: QLI26076.1 Feature: domain Description: DinI Location: 3660899-3661085 bp Feature: domain Description: DinI Location: 3660899-3661 085 bp Feature: gene Location: 3661101-3661289 bp Feature: gene Location: 3661390-3662877 bp Ori: QLI26077.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3661795-3662485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3661 795-3662485 bp Feature: gene Location: 3663365-3664345 bp Ori: QLI27876.1 Feature: domain Description: int Location: 3663368-3664295 bp Feature: domain Description: int Location: 3663368-3664295 bp Feature: gene Location: 3664468-3665031 bp Ori: QLI26078.1 Feature: domain Description: YbjK Location: 3664474-3665011 bp Feature: domain Description: YbjK Location: 3664474-366501 1 bp Feature: gene Location: 3747249-3748346 bp Ori: QLI26151.1 Gene: pmrB Feature: domain Description: PRK10755 Location: 3747276-3748320 bp Feature: domain Description: PRK1 0755 Location: 3747276-3748320 bp Feature: gene Location: 3748595-3750616 bp Ori: QLI26152.1 Gene: uvrB Feature: domain Description: UvrB Location: 3748601-3750602 bp Feature: domain Description: UvrB Location: 3748601 -3750602 bp Feature: gene Location: 3751075-3752562 bp Ori: QLI26153.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3751480-3752170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3751 480-37521 70 bp Feature: gene Location: 3752938-3753150 bp Feature: gene Location: 3753237-3753959 bp Ori: QLI26155.1 Feature: domain Description: LivF Location: 3753240-3753918 bp Feature: domain Description: LivF Location: 3753240-375391 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IclR (pfam01614), PRK15440 (L-rhamnonate dehydratase; Provisional), RVT-GII, MFS_ExuT_GudP_like (cd17319), PRK10597 (DNA damage-inducible protein I; Provisional), Laminin_G_3 (pfam13385), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), PinE (COG1961)
DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), int (PHA02601), YbjK (COG3226), PRK10755 (two-component system sensor histidine kinase PmrB), UvrB (pfam12344), LivF (COG0410)

Seq: CP049952.1 Klebsiella pneumoniae strain 19KM1053 plasmid pMBR_DHA-1_1CV3, complete sequence (37432 bp)
Overview 1 RT 1: 14741-17897 bp Neighborhood of RT #1 [14741, 17914] Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 14741-15438 bp Feature: domain Description: Zn_Tnp_IS1 Location: 14747-14849 bp Feature: domain Description: Zn_Tnp_IS1 Location: 14747-14849 bp Feature: domain Description: HTH_Tnp_IS1 Location: 14870-15002 bp Feature: domain Description: HTH_Tnp_IS1 Location: 14870-15002 bp Feature: gene Location: 15472-15597 bp Feature: gene Location: 15590-17077 bp Ori: QLI28041.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15995-16685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15995-16685 bp Feature: gene Location: 17390-17505 bp Feature: gene Location: 17483-17914 bp Ori: QLI28042.1 Gene: umuD Feature: domain Description: PRK10276 Location: 17534-17897 bp Feature: domain Description: PRK102 76 Location: 17534-17897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)