myRT

myRT report for GCA_013416125.1_ASM1341612v1

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Seq: CP049955.1 Klebsiella pneumoniae strain 19KM1109 plasmid pMBR_DHA-1_1C, complete sequence (54471 bp)
Overview 1 RT 1: 8257-10992 bp Neighborhood of RT #1 [8257, 11428] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Feature: gene Location: 8257-8688 bp Ori: QLI33395.1 Gene: umuD Feature: domain Description: PRK10276 Location: 8308-8671 bp Feature: domain Description: PRK1 0276 Location: 8308-8671 bp Feature: gene Location: 8666-8781 bp Feature: gene Location: 9094-10579 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9499-10099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9499-1 0099 bp Feature: gene Location: 10572-10697 bp Feature: gene Location: 10731-11428 bp Feature: domain Description: Zn_Tnp_IS1 Location: 10737-10839 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1 0737-1 0839 bp Feature: domain Description: HTH_Tnp_IS1 Location: 10860-10992 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1 0860-1 0992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759)

Seq: CP049953.1 Klebsiella pneumoniae strain 19KM1109 chromosome, complete genome (5414429 bp)
Overview 1 RT 1: 1581914-1587107 bp 2 RT 2: 3020598-3024249 bp 3 RT 3: 3100751-3105852 bp 4 RT 4: 3285826-3291190 bp 5 RT 5: 3622168-3626322 bp 6 RT 6: 3708560-3715229 bp Neighborhood of RT #1 [1581914, 1587157] IclR PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #2 [3020598, 3024305] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #3 [3100751, 3105860] umuC PRK10276 RVT-GII XerC PinE Neighborhood of RT #4 [3285826, 3291243] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #5 [3622168, 3626342] DinI RVT-GII int YbjK Neighborhood of RT #6 [3708560, 3715270] PRK10755 UvrB RVT-GII LivF Feature: gene Location: 1581914-1582699 bp Ori: QLI29573.1 Feature: domain Description: IclR Location: 1581941-1582667 bp Feature: domain Description: IclR Location: 1581941-1582 667 bp Feature: gene Location: 1582710-1582895 bp Ori: QLI29574.1 Feature: domain Description: PRK15440 Location: 1582713-1582860 bp Feature: domain Description: PRK15440 Location: 1582 713-1582 860 bp Feature: gene Location: 1583225-1584712 bp Ori: QLI29575.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1583630-1584320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1583630-158432 0 bp Feature: gene Location: 1584770-1585825 bp Gene: rhmD Feature: domain Description: PRK15440 Location: 1584776-1585823 bp Feature: domain Description: PRK15440 Location: 1584776-158582 3 bp Feature: gene Location: 1585868-1587157 bp Ori: QLI33107.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1585910-1587107 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1585910-1587107 bp Feature: gene Location: 3020598-3020846 bp Ori: QLI30856.1 Feature: domain Description: PRK10597 Location: 3020601-3020841 bp Feature: domain Description: PRK10597 Location: 302 0601-302 0841 bp Feature: gene Location: 3021069-3021353 bp Feature: gene Location: 3021431-3022918 bp Ori: QLI30858.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3021836-3022526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 1836-302 2 52 6 bp Feature: gene Location: 3023368-3023577 bp Feature: gene Location: 3023574-3024305 bp Ori: QLI30860.1 Feature: domain Description: Laminin_G_3 Location: 3023910-3024249 bp Feature: domain Description: Laminin_G_3 Location: 302 3910-302 42 49 bp Feature: gene Location: 3100751-3102016 bp Ori: QLI30942.1 Feature: domain Description: umuC Location: 3100754-3102014 bp Feature: domain Description: umuC Location: 3100754-3102 014 bp Feature: gene Location: 3102018-3102437 bp Ori: QLI33205.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3102021-3102432 bp Feature: domain Description: PRK102 76 Location: 3102 02 1-3102 432 bp Feature: gene Location: 3102517-3104004 bp Ori: QLI30943.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102922-3103612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102 92 2 -3103612 bp Feature: gene Location: 3104899-3105321 bp Ori: QLI30944.1 Feature: domain Description: XerC Location: 3104935-3105280 bp Feature: domain Description: XerC Location: 3104935-31052 80 bp Feature: gene Location: 3105399-3105860 bp Feature: domain Description: PinE Location: 3105402-3105852 bp Feature: domain Description: PinE Location: 3105402 -3105852 bp Feature: gene Location: 3285826-3287091 bp Ori: QLI31127.1 Feature: domain Description: umuC Location: 3285829-3287089 bp Feature: domain Description: umuC Location: 32 8582 9-32 87089 bp Feature: gene Location: 3287094-3287513 bp Ori: QLI31128.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3287097-3287508 bp Feature: domain Description: PRK102 76 Location: 32 87097-32 87508 bp Feature: gene Location: 3287592-3289079 bp Ori: QLI31129.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3287997-3288687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 87997-32 88687 bp Feature: gene Location: 3289694-3289936 bp Ori: QLI31130.1 Feature: domain Description: DinI Location: 3289745-3289925 bp Feature: domain Description: DinI Location: 32 89745-32 8992 5 bp Feature: gene Location: 3290107-3291243 bp Ori: QLI33215.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3290287-3291190 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 32 902 87-32 91190 bp Feature: gene Location: 3622168-3622401 bp Ori: QLI31438.1 Feature: domain Description: DinI Location: 3622210-3622396 bp Feature: domain Description: DinI Location: 362 2 2 10-362 2 396 bp Feature: gene Location: 3622412-3622600 bp Feature: gene Location: 3622701-3624188 bp Ori: QLI31439.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3623106-3623796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 3106-362 3796 bp Feature: gene Location: 3624676-3625656 bp Ori: QLI33234.1 Feature: domain Description: int Location: 3624679-3625606 bp Feature: domain Description: int Location: 362 4679-362 5606 bp Feature: gene Location: 3625779-3626342 bp Ori: QLI31440.1 Feature: domain Description: YbjK Location: 3625785-3626322 bp Feature: domain Description: YbjK Location: 362 5785-362 632 2 bp Feature: gene Location: 3708560-3709657 bp Ori: QLI31513.1 Gene: pmrB Feature: domain Description: PRK10755 Location: 3708587-3709631 bp Feature: domain Description: PRK10755 Location: 3708587-3709631 bp Feature: gene Location: 3709906-3711927 bp Ori: QLI31514.1 Gene: uvrB Feature: domain Description: UvrB Location: 3709912-3711913 bp Feature: domain Description: UvrB Location: 3709912 -3711913 bp Feature: gene Location: 3712386-3713873 bp Ori: QLI31515.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3712791-3713481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3712 791-3713481 bp Feature: gene Location: 3714249-3714461 bp Feature: gene Location: 3714548-3715270 bp Ori: QLI31517.1 Feature: domain Description: LivF Location: 3714551-3715229 bp Feature: domain Description: LivF Location: 3714551-37152 2 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IclR (pfam01614), PRK15440 (L-rhamnonate dehydratase; Provisional), RVT-GII, MFS_ExuT_GudP_like (cd17319), PRK10597 (DNA damage-inducible protein I; Provisional), Laminin_G_3 (pfam13385), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), PinE (COG1961)
DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), int (PHA02601), YbjK (COG3226), PRK10755 (two-component system sensor histidine kinase PmrB), UvrB (pfam12344), LivF (COG0410)