myRT

myRT report for GCA_013423825.1_ASM1342382v1

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Seq: CP058962.1 Klebsiella pneumoniae strain ZZW20 plasmid pZZW20-88K, complete sequence (88061 bp)
Overview 1 RT 1: 40249-45243 bp Neighborhood of RT #1 [40249, 45245] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 40249-41520 bp Ori: QLI93436.1 Feature: domain Description: umuC Location: 40252-41515 bp Feature: domain Description: umuC Location: 40252-41 51 5 bp Feature: gene Location: 41520-41945 bp Ori: QLI93437.1 Gene: umuD Feature: domain Description: PRK10276 Location: 41523-41931 bp Feature: domain Description: PRK1 0276 Location: 41 523-41 931 bp Feature: gene Location: 42348-43835 bp Ori: QLI93438.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42753-43443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42753-43443 bp Feature: gene Location: 44069-44299 bp Feature: gene Location: 44820-45245 bp Ori: QLI93440.1 Feature: domain Description: Antirestrict Location: 44955-45243 bp Feature: domain Description: Antirestrict Location: 44955-45243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: CP058961.1 Klebsiella pneumoniae strain ZZW20 plasmid pZZW20-108K, complete sequence (108036 bp)
Overview 1 RT 1: 35846-41199 bp Neighborhood of RT #1 [35846, 41336] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 35846-37117 bp Ori: QLI93311.1 Feature: domain Description: umuC Location: 35849-37109 bp Feature: domain Description: umuC Location: 35849-37109 bp Feature: gene Location: 37117-37548 bp Ori: QLI93312.1 Gene: umuD Feature: domain Description: PRK10276 Location: 37168-37531 bp Feature: domain Description: PRK102 76 Location: 37168-37531 bp Feature: gene Location: 37955-39442 bp Ori: QLI93313.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38360-39050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38360-39050 bp Feature: gene Location: 39691-40662 bp Ori: QLI93314.1 Feature: domain Description: StbA Location: 39694-40639 bp Feature: domain Description: StbA Location: 39694-40639 bp Feature: gene Location: 40665-41336 bp Ori: QLI93315.1 Feature: domain Description: Plasmid_stab_B Location: 40680-40887 bp Feature: domain Description: Plasmid_stab_B Location: 40680-40887 bp Feature: domain Description: Plasmid_stab_B Location: 40992-41199 bp Feature: domain Description: Plasmid_stab_B Location: 40992 -41199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: CP058960.1 Klebsiella pneumoniae strain ZZW20 chromosome, complete genome (5513322 bp)
Overview 1 RT 1: 1400400-1404022 bp 2 RT 2: 3044178-3047928 bp 3 RT 3: 3125755-3131566 bp 4 RT 4: 3301940-3307304 bp Neighborhood of RT #1 [1400400, 1404099] RVT-GII PRK10276 Terminase_2 Neighborhood of RT #2 [3044178, 3047984] COG3436 InsE RVT-GII Laminin_G_3 Neighborhood of RT #3 [3125755, 3131622] umuC PRK10276 RVT-GII PinE Rve Neighborhood of RT #4 [3301940, 3307357] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Feature: gene Location: 1400400-1400600 bp Feature: gene Location: 1400593-1400940 bp Feature: gene Location: 1401233-1402720 bp Ori: QLI89306.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1401638-1402328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140163 8-14023 28 bp Feature: gene Location: 1403122-1403481 bp Ori: QLI89307.1 Feature: domain Description: PRK10276 Location: 1403128-1403281 bp Feature: domain Description: PRK10276 Location: 1403 128-1403 281 bp Feature: gene Location: 1403509-1404099 bp Ori: QLI89308.1 Feature: domain Description: Terminase_2 Location: 1403554-1404022 bp Feature: domain Description: Terminase_2 Location: 1403 554-1404022 bp Feature: gene Location: 3044178-3044525 bp Ori: QLI90793.1 Gene: tnpB Feature: domain Description: COG3436 Location: 3044184-3044520 bp Feature: domain Description: COG3 43 6 Location: 3 044184-3 044520 bp Feature: gene Location: 3044522-3044926 bp Ori: QLI90794.1 Feature: domain Description: InsE Location: 3044552-3044891 bp Feature: domain Description: InsE Location: 3 044552-3 044891 bp Feature: gene Location: 3045110-3046597 bp Ori: QLI90795.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3045515-3046205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 045515-3 046205 bp Feature: gene Location: 3047047-3047256 bp Feature: gene Location: 3047253-3047984 bp Ori: QLI90797.1 Feature: domain Description: Laminin_G_3 Location: 3047589-3047928 bp Feature: domain Description: Laminin_G_3 Location: 3 047589-3 047928 bp Feature: gene Location: 3125755-3127020 bp Ori: QLI90879.1 Feature: domain Description: umuC Location: 3125758-3127018 bp Feature: domain Description: umuC Location: 3 125758-3 127018 bp Feature: gene Location: 3127022-3127441 bp Ori: QLI90880.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3127025-3127436 bp Feature: domain Description: PRK10276 Location: 3 127025-3 12743 6 bp Feature: gene Location: 3127521-3129008 bp Ori: QLI90881.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3127926-3128616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 127926-3 128616 bp Feature: gene Location: 3130403-3130864 bp Feature: domain Description: PinE Location: 3130406-3130856 bp Feature: domain Description: PinE Location: 3 13 0406-3 13 0856 bp Feature: gene Location: 3130918-3131622 bp Ori: QLI90882.1 Feature: domain Description: Rve Location: 3130921-3131566 bp Feature: domain Description: Rve Location: 3 13 0921-3 13 1566 bp Feature: gene Location: 3301940-3303205 bp Ori: QLI91053.1 Feature: domain Description: umuC Location: 3301943-3303203 bp Feature: domain Description: umuC Location: 3 3 01943 -3 3 03 203 bp Feature: gene Location: 3303208-3303627 bp Ori: QLI91054.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3303211-3303622 bp Feature: domain Description: PRK10276 Location: 3 3 03 211-3 3 03 622 bp Feature: gene Location: 3303706-3305193 bp Ori: QLI91055.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3304111-3304801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 04111-3 3 04801 bp Feature: gene Location: 3305808-3306050 bp Ori: QLI91056.1 Feature: domain Description: DinI Location: 3305859-3306039 bp Feature: domain Description: DinI Location: 3 3 05859-3 3 0603 9 bp Feature: gene Location: 3306221-3307357 bp Ori: QLI93185.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3306401-3307304 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3 3 06401-3 3 073 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Terminase_2 (pfam03592), COG3436 (Transposase ), InsE (COG2963), Laminin_G_3 (pfam13385), umuC (PRK03609), PinE (COG1961), Rve (COG3316), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789)