myRT

myRT report for GCA_013423925.1_ASM1342392v1

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Seq: CP058972.1 Pseudoalteromonas sp. JSTW chromosome, complete genome (3643108 bp)
Overview 1 RT 1: 406696-411034 bp 2 RT 2: 2723043-2728850 bp Neighborhood of RT #1 [406696, 411034] XerC RVT-Retrons HTH_XRE Neighborhood of RT #2 [2723043, 2728858] RVT_N RVT-GII GIIM MscS PRK02101 Feature: gene Location: 406696-407577 bp Ori: QLJ08642.1 Feature: domain Description: XerC Location: 406741-407563 bp Feature: domain Description: XerC Location: 406741 -407563 bp Feature: gene Location: 407570-407791 bp Feature: gene Location: 408409-410370 bp Ori: QLJ08644.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 408547-409231 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 408547-409231 bp Feature: gene Location: 410445-410711 bp Ori: QLJ08645.1 Feature: domain Description: HTH_XRE Location: 410478-410658 bp Feature: domain Description: HTH_XRE Location: 41 0478-41 0658 bp Feature: gene Location: 410789-411034 bp Feature: gene Location: 2723043-2723732 bp Feature: gene Location: 2724059-2724457 bp Feature: gene Location: 2725325-2726797 bp Ori: QLJ07565.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2725373-2725616 bp Feature: domain Description: RVT_N Location: 2725373-272561 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2725661-2726288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2725661 -2726288 bp Feature: domain Description: GIIM Note: maturase Location: 2726348-2726573 bp Feature: domain Description: GIIM Note: maturase Location: 2726348-2726573 bp Feature: gene Location: 2727008-2727943 bp Ori: QLJ07566.1 Feature: domain Description: MscS Location: 2727077-2727857 bp Feature: domain Description: MscS Location: 2727077-2727857 bp Feature: gene Location: 2728079-2728858 bp Ori: QLJ07567.1 Gene: yaaA Feature: domain Description: PRK02101 Location: 2728082-2728850 bp Feature: domain Description: PRK021 01 Location: 2728082-2728850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-Retrons, HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MscS (COG0668), PRK02101 (peroxide stress protein YaaA)