myRT

myRT report for GCA_013425825.1_ASM1342582v1

Download annotations/find similar RTs

Seq: CP059052.1 Pseudomonas putida strain BS3701 chromosome, complete genome (6337358 bp)
Overview 1 RT 1: 880846-885870 bp 2 RT 2: 2291273-2296554 bp Neighborhood of RT #1 [880846, 885923] CSP_CDS RVT-Retrons LysR MMSDH Neighborhood of RT #2 [2291273, 2296554] TraI_2 TraI_2_C MvaT_DBD RVT-GII GIIM ArdC Feature: gene Location: 880846-881049 bp Feature: gene Location: 881204-881422 bp Ori: QLJ15093.1 Feature: domain Description: CSP_CDS Location: 881228-881405 bp Feature: domain Description: CSP_CDS Location: 881 228-881 405 bp Feature: gene Location: 881426-882607 bp Ori: QLJ15094.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 881564-882137 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 881 564-8821 37 bp Feature: gene Location: 883320-884264 bp Ori: QLJ15095.1 Feature: domain Description: LysR Location: 883356-884211 bp Feature: domain Description: LysR Location: 883356-88421 1 bp Feature: gene Location: 884397-885923 bp Ori: QLJ15096.1 Feature: domain Description: MMSDH Location: 884442-885870 bp Feature: domain Description: MMSDH Location: 884442-885870 bp Feature: gene Location: 2291273-2292985 bp Ori: QLJ16315.1 Feature: domain Description: TraI_2 Location: 2291339-2292272 bp Feature: domain Description: TraI_2 Location: 2291 339-2292272 bp Feature: domain Description: TraI_2_C Location: 2292617-2292974 bp Feature: domain Description: TraI_2_C Location: 229261 7-2292974 bp Feature: gene Location: 2293527-2293892 bp Ori: QLJ16316.1 Feature: domain Description: MvaT_DBD Location: 2293767-2293887 bp Feature: domain Description: MvaT_DBD Location: 2293767-2293887 bp Feature: gene Location: 2294364-2295134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294367-2294685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294367-2294685 bp Feature: domain Description: GIIM Note: maturase Location: 2294742-2294967 bp Feature: domain Description: GIIM Note: maturase Location: 2294742-2294967 bp Feature: gene Location: 2295216-2296154 bp Ori: QLJ16317.1 Feature: domain Description: ArdC Location: 2295222-2296131 bp Feature: domain Description: ArdC Location: 2295222-22961 31 bp Feature: gene Location: 2296240-2296554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CSP_CDS (cd04458), RVT-Retrons, LysR (COG0583), MMSDH (TIGR01722), TraI_2 (pfam07514), TraI_2_C (pfam07515), MvaT_DBD (cl40688), RVT-GII, GIIM (pfam08388), ArdC (COG4227)