myRT

myRT report for GCA_013426715.1_ASM1342671v1

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Seq: AP023283.1 Agrobacterium vitis VAT03-9 plasmid pTiRvVAT039 DNA, complete sequence (257173 bp)
Overview 1 RT 1: 90247-99676 bp Neighborhood of RT #1 [90247, 99705] InsE PHA02517 RVT-GII Phage_int_SAM_4 INT_RitA_C_like INT_RitB_C_like DDE_3 INT_RitC_C_like RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 90247-90576 bp Ori: BCH68168.1 Feature: domain Description: InsE Location: 90253-90565 bp Feature: domain Description: InsE Location: 90253-90565 bp Feature: gene Location: 90573-91025 bp Ori: BCH68169.1 Feature: domain Description: PHA02517 Location: 90639-90993 bp Feature: domain Description: PHA0251 7 Location: 90639-90993 bp Feature: gene Location: 91650-92408 bp Ori: BCH68170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91908-92310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 908-9231 0 bp Feature: gene Location: 92736-93698 bp Ori: BCH68171.1 Feature: domain Description: Phage_int_SAM_4 Location: 92811-93039 bp Feature: domain Description: Phage_int_SAM_4 Location: 9281 1 -93039 bp Feature: domain Description: INT_RitA_C_like Location: 93129-93666 bp Feature: domain Description: INT_RitA_C_like Location: 931 29-93666 bp Feature: gene Location: 93698-94675 bp Ori: BCH68172.1 Feature: domain Description: INT_RitB_C_like Location: 94031-94613 bp Feature: domain Description: INT_RitB_C_like Location: 94031 -9461 3 bp Feature: gene Location: 95956-96510 bp Ori: BCH68175.1 Feature: domain Description: DDE_3 Location: 96004-96415 bp Feature: domain Description: DDE_3 Location: 96004-9641 5 bp Feature: gene Location: 96514-96843 bp Ori: BCH68176.1 Feature: domain Description: INT_RitC_C_like Location: 96532-96763 bp Feature: domain Description: INT_RitC_C_like Location: 96532-96763 bp Feature: gene Location: 96966-97802 bp Ori: BCH68177.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96969-97281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96969-97281 bp Feature: domain Description: GIIM Note: maturase Location: 97353-97581 bp Feature: domain Description: GIIM Note: maturase Location: 97353-97581 bp Feature: gene Location: 97918-98286 bp Ori: BCH68178.1 Feature: domain Description: PHA02517 Location: 97927-98194 bp Feature: domain Description: PHA0251 7 Location: 97927-981 94 bp Feature: gene Location: 98683-99705 bp Ori: BCH68179.1 Feature: domain Description: COG3547 Location: 99169-99676 bp Feature: domain Description: COG3547 Location: 991 69-99676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), DDE_3 (pfam13358), INT_RitC_C_like (cd01182), GIIM (pfam08388), COG3547 (Transposase )