myRT

myRT report for GCA_013426775.1_ASM1342677v1

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Seq: AP023265.1 Klebsiella pneumoniae KAM260 plasmid pKAM260_1 DNA, complete sequence (217495 bp)
Overview 1 RT 1: 1595-7767 bp Neighborhood of RT #1 [1595, 7778] Phage_integrase COG3547 RVT-GII GIIM InsE Feature: gene Location: 1595-2335 bp Ori: BCH47152.1 Gene: int_4 Feature: domain Description: Phage_integrase Location: 1727-2243 bp Feature: domain Description: Phage_integrase Location: 1 727-2243 bp Feature: gene Location: 3291-4367 bp Ori: BCH47153.1 Feature: domain Description: COG3547 Location: 3330-4251 bp Feature: domain Description: COG3547 Location: 3330-4251 bp Feature: gene Location: 4909-6432 bp Ori: BCH47154.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5182-5914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 82-591 4 bp Feature: domain Description: GIIM Note: maturase Location: 5989-6187 bp Feature: domain Description: GIIM Note: maturase Location: 5989-61 87 bp Feature: gene Location: 7063-7356 bp Feature: gene Location: 7476-7778 bp Ori: BCH47156.1 Feature: domain Description: InsE Location: 7485-7767 bp Feature: domain Description: InsE Location: 7485-7767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: AP023264.1 Klebsiella pneumoniae KAM260 DNA, complete genome (5274256 bp)
Overview 1 RT 1: 1402148-1404862 bp 2 RT 2: 3021067-3025651 bp Neighborhood of RT #1 [1402148, 1405026] RVT-GII PRK10276 Neighborhood of RT #2 [3021067, 3025704] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Feature: gene Location: 1402148-1402297 bp Feature: gene Location: 1402610-1402843 bp Feature: gene Location: 1402972-1404381 bp Ori: BCH43469.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403299-1403989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14032 99-1403989 bp Feature: gene Location: 1404459-1404698 bp Feature: gene Location: 1404700-1405026 bp Ori: BCH43471.1 Feature: domain Description: PRK10276 Location: 1404703-1404862 bp Feature: domain Description: PRK102 76 Location: 1404703-1404862 bp Feature: gene Location: 3021067-3021543 bp Ori: BCH45003.1 Feature: domain Description: umuC Location: 3021076-3021514 bp Feature: domain Description: umuC Location: 302 1076-302 1514 bp Feature: gene Location: 3021540-3021959 bp Ori: BCH45004.1 Feature: domain Description: PRK10276 Location: 3021543-3021954 bp Feature: domain Description: PRK102 76 Location: 302 1543-302 1954 bp Feature: gene Location: 3022038-3023525 bp Ori: BCH45005.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3022443-3023133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 2 443-302 3133 bp Feature: gene Location: 3024139-3024381 bp Ori: BCH45006.1 Gene: msgA Feature: domain Description: DinI Location: 3024190-3024370 bp Feature: domain Description: DinI Location: 302 4190-302 4370 bp Feature: gene Location: 3024565-3025704 bp Ori: BCH45007.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3024748-3025651 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 302 4748-302 5651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789)