myRT

myRT report for GCA_013427035.1_ASM1342703v1

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Seq: AP023270.1 Agrobacterium vitis VAR03-1 plasmid pRvVAR031a DNA, complete sequence (648626 bp)
Overview 1 RT 1: 434047-436748 bp Neighborhood of RT #1 [434047, 436771] RVT-GII RVT-GII InsE Feature: gene Location: 434047-434223 bp Feature: gene Location: 434632-434841 bp Feature: gene Location: 435134-435490 bp Ori: BCH57068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435146-435344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4351 46-435344 bp Feature: gene Location: 435596-435805 bp Feature: gene Location: 435751-436020 bp Ori: BCH57070.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435859-435910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435859-43591 0 bp Feature: gene Location: 435978-436145 bp Feature: gene Location: 436535-436771 bp Ori: BCH57072.1 Feature: domain Description: InsE Location: 436538-436748 bp Feature: domain Description: InsE Location: 436538-436748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)

Seq: AP023268.1 Agrobacterium vitis VAR03-1 DNA, chromosome 1, complete sequence (3604775 bp)
Overview 1 RT 1: 1067564-1074542 bp Neighborhood of RT #1 [1067564, 1074542] Tar Tar RVT-G2L4 MFS_TetA Feature: gene Location: 1067564-1070092 bp Ori: BCH53354.1 Feature: domain Description: Tar Location: 1068683-1069115 bp Feature: domain Description: Tar Location: 1068683-1069115 bp Feature: domain Description: Tar Location: 1069166-1070051 bp Feature: domain Description: Tar Location: 1069166-1070051 bp Feature: gene Location: 1071153-1071308 bp Feature: gene Location: 1071394-1072668 bp Ori: BCH53356.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 1071568-1072207 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 1071568-1072 2 07 bp Feature: gene Location: 1073046-1074239 bp Ori: BCH53357.1 Gene: tetA Feature: domain Description: MFS_TetA Location: 1073061-1074195 bp Feature: domain Description: MFS_TetA Location: 1073061-1074195 bp Feature: gene Location: 1074282-1074542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tar (COG0840), RVT-G2L4, MFS_TetA (cd17388)