myRT

myRT report for GCA_013457875.1_ASM1345787v1

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Seq: CP046672.1 Raoultella ornithinolytica strain 172117885 chromosome, complete genome (5575249 bp)
Overview 1 RT 1: 3478454-3483055 bp 2 RT 2: 4436882-4442991 bp Neighborhood of RT #1 [3478454, 3483057] PRK10598 pyrC_dimer RVT-GII PRK10597 bssS Neighborhood of RT #2 [4436882, 4443032] GtrA PRK09692 RVT-Retrons Aes Feature: gene Location: 3478454-3479014 bp Ori: QLK22280.1 Feature: domain Description: PRK10598 Location: 3478457-3479012 bp Feature: domain Description: PRK1 0598 Location: 3478457-347901 2 bp Feature: gene Location: 3479137-3480183 bp Ori: QLK22281.1 Gene: pyrC Feature: domain Description: pyrC_dimer Location: 3479161-3480178 bp Feature: domain Description: pyrC_dimer Location: 34791 61 -34801 78 bp Feature: gene Location: 3480276-3481760 bp Ori: QLK24232.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3480678-3481368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3480678-3481 368 bp Feature: gene Location: 3482165-3482416 bp Ori: QLK22282.1 Gene: dinI Feature: domain Description: PRK10597 Location: 3482168-3482405 bp Feature: domain Description: PRK1 0597 Location: 34821 68-3482405 bp Feature: gene Location: 3482803-3483057 bp Ori: QLK24233.1 Gene: bssS Feature: domain Description: bssS Location: 3482806-3483055 bp Feature: domain Description: bssS Location: 3482806-3483055 bp Feature: gene Location: 4436882-4437217 bp Ori: QLK24265.1 Feature: domain Description: GtrA Location: 4436885-4437209 bp Feature: domain Description: GtrA Location: 4436885-4437209 bp Feature: gene Location: 4437838-4438335 bp Feature: domain Description: PRK09692 Location: 4437847-4438330 bp Feature: domain Description: PRK09692 Location: 4437847-4438330 bp Feature: gene Location: 4438853-4440688 bp Ori: QLK23105.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4438988-4439687 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4438988-4439687 bp Feature: gene Location: 4441332-4441718 bp Feature: gene Location: 4442130-4443032 bp Ori: QLK23107.1 Feature: domain Description: Aes Location: 4442181-4442991 bp Feature: domain Description: Aes Location: 44421 81 -4442991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10598 (lipoprotein; Provisional), pyrC_dimer (TIGR00856), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), bssS (PRK12301), GtrA (pfam04138), PRK09692 (Integrase; provisional), RVT-Retrons, Aes (COG0657)